Methylosinus sporium: MSP5_001437
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Entry
MSP5_001437 CDS
T11225
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mspr Methylosinus sporium
Pathway
mspr00020
Citrate cycle (TCA cycle)
mspr00190
Oxidative phosphorylation
mspr00650
Butanoate metabolism
mspr00720
Other carbon fixation pathways
mspr01100
Metabolic pathways
mspr01110
Biosynthesis of secondary metabolites
mspr01120
Microbial metabolism in diverse environments
mspr01200
Carbon metabolism
Module
mspr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mspr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mspr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MSP5_001437 (sdhA)
00650 Butanoate metabolism
MSP5_001437 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MSP5_001437 (sdhA)
00720 Other carbon fixation pathways
MSP5_001437 (sdhA)
Enzymes [BR:
mspr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MSP5_001437 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
Pyr_redox_2
DAO
Motif
Other DBs
NCBI-ProteinID:
XWX54411
LinkDB
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Position
complement(1508045..1509874)
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AA seq
609 aa
AA seq
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MAGNGKTTVNIGGRAYPIVDHTFDVVVVGAGGAGLRAVVGCAKAGLKAACITKVFPTRSH
TVAAQGGVAAALANMGPDDWKWHMYDTVKGSDWLGDQDAIEYLCRNAPQAVYELEHWGVP
FSRTEDGRIYQRPFGGMTTDYGRGPPAQRTCAAADRTGHAMLHTLYGQALRHDTEFFVEY
FAIDLIVDAEGAVRGVVCLKLDDGTIHRFRAALTVLATGGYGRAYLSATSAHTCTGDGGG
MALRAGLPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPSVKDLA
PRDMVSRAMTVEIREGRGVGKLNDHIHLHLEHLDPAILHERLPGISESAKIFAGVDVTRE
PIPVLPTVHYNMGGIPTNFHGEALRRIGDNPDVVVPGLMAIGEAACVSVHGANRLGSNSL
VDLVVFGRAAGLRAAELVKPGQTQPELPADSAELSLSRLDARRFASGSIATADLRLEMQR
VMQSHCAVYRAGEVLEEGSQAIHAVWKKSDDVKVTDRSLIWNSDLVETLEYDNLIVQAVV
TMDSAKNRTESRGAHAREDFPNRDDTDWMKHTLSTIDEAGKSVAIDYRPVHSYTLSNEVA
YIEPKARVY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaacggcaagacgacggtgaatatcgggggcagggcctatccgatcgtcgat
catacattcgacgtcgtcgtcgtcggcgccggcggcgcgggactgcgcgccgtcgtcggc
tgcgccaaggcggggctgaaagccgcctgcatcacaaaagtgtttcccactcgttcgcat
acggtggcggcgcagggcggcgtcgccgcagcgctggccaatatggggccggacgattgg
aaatggcacatgtacgacaccgtcaagggctccgactggctcggagaccaggacgcgatc
gaatatctctgccgcaacgctccgcaagccgtctatgagctcgagcattggggcgtgccc
ttctcgcgcaccgaggatggccgcatctatcagcgccccttcggcggcatgacgacggat
tacggaagaggcccgccggcgcagcgcacttgcgccgccgccgaccgtaccggccatgcg
atgctgcatacgctctacggccaggcgctgcgtcacgacacggagttcttcgtcgaatat
ttcgccatcgacctcatcgtcgatgcggagggcgccgtgcgcggcgtcgtgtgcctcaag
ctcgacgacggcacgatccatcgtttccgcgccgcgctcaccgtgctggcgacgggcggc
tatggccgcgcctatctctccgcgacgtcggcgcacacatgcacgggcgatggcggcggc
atggcgctgcgcgccgggcttcccttgcaggatatggaattcgtgcaattccatccgacc
ggcatttatggcgcgggctgcctcatcaccgagggcgcgcgcggcgagggcggatatctc
accaatagcgagggcgagcgcttcatggagcgctatgcgccttcggtgaaagatctcgcg
ccgcgcgacatggtctcgcgcgcgatgacagtggagattcgcgagggccgcggcgtcggc
aaattgaacgatcacatccatctgcatctcgagcatttggatcctgcgatcctgcatgag
cgcctgccgggcatttccgagagcgcgaagattttcgctggcgtcgatgtgacgcgcgag
cctattcctgtgctgccgaccgtgcattacaatatgggcggcataccgacgaattttcac
ggcgaggcgctgcgccgcatcggcgacaatcctgatgtcgtcgtgccgggcctgatggcg
atcggcgaggcggcctgcgtctccgtgcatggcgccaatcgtctcggctccaattcgctg
gtcgacctcgtcgtcttcggccgcgccgcgggactgcgcgccgccgagctggtgaagccc
ggtcagacgcagccggagttgcccgccgattccgccgagctctctctgtcgcgtctcgat
gcacgtcgcttcgcctccggctcgattgcgaccgccgatctgcggctcgagatgcagcgc
gtgatgcagtcgcattgcgccgtctatcgcgccggtgaggtgctggaggagggatcgcag
gcgatccatgcggtgtggaagaagagcgacgacgtcaaggtcacggaccgctcgctgatc
tggaactccgatctcgtcgagacgctggaatatgacaacctcatcgtgcaggcggtggtg
acgatggattcggcgaagaaccgcaccgaatcccgcggcgctcacgcccgcgaggatttt
cccaaccgcgacgacaccgattggatgaagcacacgctttcgacgatcgacgaggcgggc
aagagcgtcgcgatcgattatcgcccggtgcacagctacacgctgtccaatgaagtggct
tatatcgagccgaaggcgcgggtttattga
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