Methylosinus sporium: MSP5_001566
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Entry
MSP5_001566 CDS
T11225
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mspr Methylosinus sporium
Pathway
mspr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSP5_001566 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mspr03400
]
MSP5_001566 (uvrB)
DNA repair and recombination proteins [BR:
mspr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSP5_001566 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSP5_001566 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
UB2H
DUF2963
Kinesin
Microtub_bd
SWI2_SNF2
DUF87
DUF3772
Motif
Other DBs
NCBI-ProteinID:
XWX54540
LinkDB
All DBs
Position
complement(1653042..1655552)
Genome browser
AA seq
836 aa
AA seq
DB search
MASPPKKPKNPAKPTRAKAAKPEVSPIAPHLQALLNPGLAERQAGFEEAPQAAYDAGAID
GELVDLGGAGGVSATMESLEQLLKLGDPNLREKRPWTPHRPERPQKSEGGVKFDLVSDYE
PRGDQPQAIEELVAGIEANERDQVLLGVTGSGKTYTMAQVIARTQRPALVLAPNKTLAAQ
LYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSVNEQIDRMRHAATRALLE
RDDVIIVASVSCIYGIGSVETYTAMTFGVSLGEKLEQRQLVTDLVALQYRRIGSDFTRGT
FRVRGDTVDIFPAHYEDRGWRISFFGDEVESICEFDPLTGKKTQDLEFVKVYANSHYVTP
RPTLLQSIKAIKDELRGRLGELNNAGRLVEAQRLEQRTRFDLEMMEATGSCAGIENYSRY
LTGRKPGEPPPTLFEYLPDNSIVFADESHVSIPQIGAMYKGDFRRKATLAEYGFRLPSCM
DNRPLRFEEWDAMRPQSVAVSATPGDWEMERTGGVFVEQVIRPTGLIDPPVEIRPARSQV
DDLLGEVKAVSDAGYRSLVTVLTKRMAEDLTEYLHENGVRVRYMHSDIDTIERIEIIRDL
RLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLVQTIGRAARNVDGRVIL
YADHITGSMQRAMDETDRRRAKQQAYNAEHGITPASIKRDIADILGSLAEQDHVTVDAGL
SELAPGHNMQATLADLEKRMKAAAADLAFEEAARLRDEISRLQRAELLAEANPLMRPRGR
GGETPAISGTRARKPTDADMGPHNFGGGEARPLSRPAPRSMAGKAGTKVVKGKLNK
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccacctaaaaagccgaaaaaccccgcgaagccgacgcgcgccaaggccgcc
aagcccgaggtgtcgccgatcgcgccccatttgcaggcgttgctcaatcccggcctcgcc
gagcggcaggcgggcttcgaggaggcgccgcaggcggcctatgacgccggcgcgatcgat
ggggagctcgtcgatctcggcggagcaggcggcgtctcggcgacgatggagagcctcgag
cagctgctgaagctcggcgatcccaatctgcgggagaagcggccgtggacgccgcatcgg
ccggagcggccgcagaagagcgaaggcggcgtcaaattcgatctcgtctccgattacgag
ccgcgcggcgaccagccgcaggcgatcgaggagctggtcgccggcatagaggcgaatgag
cgcgatcaggtgctgctcggcgtcaccggctccggcaagacctatacgatggcgcaggtg
atcgcccgcacgcagcggccggcgctggtgctggcgcccaataagacgctggccgcgcag
ctctatggtgagttcaaaagctttttccccaacaacgccgtcgaatatttcgtctcctat
tacgattattatcagcccgaggcctatgtgccgcgcaccgacacctacatcgagaaagaa
tcctcggtgaatgagcagatcgaccggatgcgccacgccgcgacgcgcgcgctgctggag
cgcgacgacgtcatcatcgtcgcctccgtgtcctgcatctacggcataggatcggtcgag
acctacaccgcgatgactttcggcgtcagcctcggcgagaaattggagcagcgtcagctc
gtcaccgatctcgtcgctctgcaatatcgccgcattggctccgatttcacgcgcggcacg
tttcgcgtgcgcggcgatacggtcgatattttcccggctcactatgaggaccgcggttgg
cgcatctccttcttcggcgatgaggtggagtcgatctgcgagttcgatccattgacgggg
aagaagacgcaggacctcgaattcgtgaaggtctacgccaattcgcattatgtgacgccg
cgcccgacgctgctgcaatcgatcaaggcgatcaaggacgaattgcgggggcggctcggc
gagctgaacaatgccgggcgtctcgtcgaggcgcagcgattggagcagcgcacgcgcttc
gatctcgagatgatggaggcgaccggctcttgcgccggcatcgagaattactcgcgctat
ctcaccggtcgcaagcccggcgagccgccgcctactctgttcgaatatctgccggacaat
tccatcgtcttcgccgacgagagccatgtgagcattccgcagatcggcgccatgtacaag
ggcgacttccgccgcaaggcgacgctcgccgaatatggctttcgcctgccgtcctgcatg
gacaatcgtccgctgcgcttcgaggaatgggacgcgatgcgcccgcaatcggtcgccgtc
tcggcgacgccgggcgattgggagatggagcgcacgggcggcgtcttcgtcgagcaggtc
attcgcccgaccggtctcatcgatccgcctgtggagatacgtccggcgcgctcgcaggtc
gatgatcttctcggcgaggtgaaggcggtgagcgacgcgggctatcgctcgctcgtcacc
gtgctgaccaaacggatggcggaggacctcaccgaatatctgcatgagaatggcgtgcgc
gtgcgctatatgcattcggatatagacacgatcgagcgcatcgagatcattcgcgatctg
cgcctcggcgccttcgacgtgctggtcggcatcaatcttctgcgcgagggattggatatt
ccagaatgcggcttcgtcgccattctcgacgccgataaggaaggttttttgcgctcagag
acatcgctggtgcagaccatcggccgcgccgcgcgcaatgtcgacggacgcgtgatcctc
tatgcggatcacatcaccggctccatgcagcgcgccatggacgagaccgatcgccgccgc
gccaagcagcaggcctataacgccgagcatggcatcacgccggcgagcataaagcgcgac
atcgccgatattctcggctcgctcgccgagcaggatcatgtgaccgtggacgccggcctc
tccgagctggcgccgggccacaatatgcaggcgacgctcgccgatctcgagaagcgcatg
aaggcggccgccgccgatctcgccttcgaggaggcggcaaggctgcgcgacgagatttcc
cgcctgcaacgcgccgagcttctcgccgaagccaatccgctgatgcgcccgcgcgggcgg
ggaggggagacgcctgcgatctccggcacgcgcgcgcgcaagccgaccgacgccgacatg
ggtccgcataatttcggcggcggcgaagcgcggccgctgtcgcgccctgcgccgcggtcg
atggcgggcaaggcggggacgaaggtggtgaaggggaagctgaataaatag
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