Methylosinus sporium: MSP5_001896
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Entry
MSP5_001896 CDS
T11225
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mspr Methylosinus sporium
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mspr03009
]
MSP5_001896 (rimO)
Enzymes [BR:
mspr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MSP5_001896 (rimO)
Ribosome biogenesis [BR:
mspr03009
]
Prokaryotic type
ribosomal protein modification factors
MSP5_001896 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
YajR_YAM
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
XWX54868
LinkDB
All DBs
Position
1977382..1978740
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AA seq
452 aa
AA seq
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MQNVPSDPPAPTKEAPRVSFVSLGCPKALVDSERILTRLRAEGYELSRTHAGADVVVVNT
CGFLDSAKAESLEAIGAALKENGKVVVTGCMGAEPQAITERFPDVLAITGPQAYESVVEA
VHAAAAPSHDPFLDLVPEQGVKLTPRHYAYLKISEGCDNSCSFCIIPHLRGSLASRPAGE
VLREAERLVKAGVKELLVISQDTSAYGRDLRYSESQWGDRSVRARFLDLTRELGSLGAWV
RLHYVYPYPHVDEVVELMAQGNILPYLDIPFQHAAPSVLKAMKRPANEEKTLERIKAWRR
ICPDLALRSTFIVGFPGETEEDFAYLLDWLEEAEIDRAGAFRYEPVAGAPANDLPLDAIP
PEVKDQRWKRFMERQQKVSARLLKRKIGKRLQVLVDEPGGGATGLARGRSKTDAPQIDGT
VHISSRRPLRAGDIVTVKIDRADAYDLYGAAV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgtcccctccgacccgcccgcgcccaccaaagaggcgccgcgcgtctccttc
gtctcgctcggctgccccaaggcgctcgtcgacagcgagcgcattctcacgcgcctgcgc
gccgaaggctatgagctttcgcgcacccatgcgggggccgatgtcgtagtggtgaacacc
tgcggctttctggacagcgccaaggccgagtcgctggaggcgatcggcgccgcgctgaag
gagaatggcaaggtcgtcgtcaccggctgcatgggcgccgagccgcaggcgatcaccgag
cgattccccgacgtgttggcgatcaccggcccgcaagcctatgagagcgtggtcgaggcc
gtccacgccgccgccgcgccgagccatgacccgtttctcgatctcgtgcccgagcagggc
gtcaagctcacgccgcgccattacgcctatctcaaaatctcggaaggctgcgacaatagc
tgctccttctgcatcattccgcatttgcgcggctcgctggcctcgcgaccggccggcgag
gtgctgcgcgaggccgagcggctggtgaaggccggcgtcaaagagctgctcgtcatctcg
caggacaccagcgcctatggccgcgatctgcgctactccgaaagccaatggggcgaccgc
agcgtgcgcgcgcgtttcctcgatctcacacgcgagctgggctcgctcggggcctgggtg
cggctacattatgtctatccctatccgcatgtggacgaggtcgtcgagctgatggcgcag
ggcaatatcctgccctatctcgacattccttttcagcacgccgccccttccgtgctgaag
gcgatgaagcgtcccgccaatgaggagaagacgctggagcggataaaggcgtggcggcgc
atctgccccgatctcgcgctgcgctccactttcatcgtcggcttccccggcgagacggag
gaggatttcgcctatctgctcgattggctggaggaggcggagatcgaccgcgccggcgcc
ttccgctacgagcccgtggccggcgccccggccaatgatctgccgctcgacgccatcccg
cccgaggtgaaggaccagcgctggaagcgcttcatggagcgccagcagaaggtgagcgcc
cgcctgctgaagcgcaagatcggcaagcgcctgcaagttctggtggacgagccgggcggc
ggcgcgaccggcctcgcgcgtggacgcagcaagacggacgccccgcagatcgacggaacg
gtgcacatctcctcgcgccgcccgctgcgcgccggcgacattgtgacggtgaagatcgac
cgcgccgacgcctatgatctctatggcgcggcggtgtga
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