Methylosinus sporium: MSP5_001999
Help
Entry
MSP5_001999 CDS
T11225
Name
(GenBank) amino acid decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
mspr Methylosinus sporium
Pathway
mspr00330
Arginine and proline metabolism
mspr00480
Glutathione metabolism
mspr01100
Metabolic pathways
mspr01110
Biosynthesis of secondary metabolites
mspr04148
Efferocytosis
Module
mspr_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
MSP5_001999
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MSP5_001999
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MSP5_001999
Enzymes [BR:
mspr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
MSP5_001999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
XWX54968
LinkDB
All DBs
Position
2078854..2081211
Genome browser
AA seq
785 aa
AA seq
DB search
MDFSRRFTFLFSAPNFEADDLEGLRVNQIIAAIESMGFQVVRARRVEDAEIVVQTDAAIG
CLVVDWGKKGLEGKTASLIDLMRKRGLEMPIVLLIRRKRFEDIPVEVLDFIDGYVFLAEE
TPEFIAKNLVSRLKQYAETLKTPFFGALVDYAEEGNQLWTCPGHNGGIFYSRSPIGRIFM
EHLGEAVFRDDLDNSVVELGDLLTHEGPALAAQKAAAEIFGAEKTYFVLNGTSSSNKVVL
TNLVAEGDLVLFDRNNHKAAHHGALLLGGGVPIFLPTTRNAHGLIGPIEHEAFDEEKLRE
RIRANPLVKDKDAWRKERPFRAAVIEQCTYDGTIHNAEWIVGKIGHLCDYILFDEAWAGF
MKFHPLYERRYAMGLKNLTEASPGIVATQSTHKQLASFSQASQIHVRDRHIKGQRRRVEH
RRFNEGFMQHASTSPFYPLFASLDVGAQMMKGRSGELLWDDTIRLGIELRKKLRAVRREF
EAKEQDPARRWFFDPFAPDWVSIPDAARESGAHRVPWESVSTDQLARNPEFWALAPDARW
HGFSNMAAGFAITDPAKLTLLTPGFDRETGAYADHGIPAPIVAQYLRENRIVPEKNDLNS
LLFLLTPGVESSKAGTLVSSLVAFKRLHDDNALLQDVIPEFVARRAARYRGVRLRDLCAD
MHRFFKEANASALQQAQFRQEHLPEMAMTPREAYLRLVRNDVDFLPIDEIEGRIATTLFV
IYPPGIATIVPGERLGAQARPMLEYLRMFERSANLFPGFDYEIQGLYKQWNGEAKMRLYT
YVVQE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcccgccgcttcactttcctcttctccgcgcccaatttcgaggccgatgac
ctcgaggggctgcgcgtcaatcagatcatcgcggcgatcgagagcatgggctttcaggtc
gtgcgcgcgcgccgcgtggaggacgccgagatcgtcgtgcagaccgacgccgccatcggc
tgcctcgtcgtcgattggggcaagaaaggcctcgagggcaagacggcctcgctcatcgat
ctcatgcgcaagcgcggcctcgaaatgccgatcgtgctgctcattcgccgcaagcgcttc
gaggatattccggtcgaggtgttggacttcatcgacggctatgtcttcctcgccgaggag
acgcctgagttcatcgccaaaaatctcgtctcgcgcctgaagcaatatgcggagacgctg
aagacgcctttcttcggcgcgctggtcgattatgcggaggagggcaatcagctatggacc
tgccccggccataatggcggcattttctacagccgcagtccgatcggccgcatcttcatg
gagcatttgggcgaggccgtgttccgcgacgatctcgacaattccgtcgtcgagctcggc
gatctattgacccatgaagggccagcgctcgccgcgcaaaaggcggcggccgaaatcttc
ggcgcggagaagacctatttcgttctcaatggcacatcctcctccaataaggtcgtgctc
accaatctggtcgccgagggcgatctcgtgctgttcgaccgcaataatcacaaggccgcg
catcatggcgccctgctgctcggcggcggcgtcccgatctttctgccgacgacgcgcaat
gcgcatggcctcatcggcccgatcgagcacgaggccttcgacgaggagaaattgcgcgag
cgcattcgcgccaatcctctggtgaaggacaaggacgcctggcgcaaggagaggccgttc
cgcgccgcggtcatcgagcaatgcacctatgacggcaccatccataacgccgaatggatc
gtcggcaaaatcggccatttgtgcgattacattctcttcgacgaagcctgggccggcttc
atgaagtttcatccgctctatgagcggcgctatgcgatggggctcaagaacctcaccgag
gcgtcgcccggaatcgtcgcgacgcaatcgacgcataagcagctcgccagcttctcgcag
gcttcgcaaatccatgtgcgcgatcgccatataaagggccagcggcggcgcgtggaacat
cgccgcttcaacgaaggctttatgcagcacgcctccacctcgcccttctatccgctgttc
gcctcgctggatgtcggcgcgcagatgatgaagggccgctccggcgagcttttgtgggac
gacacgattcggctcggcatagagctgcgcaagaagctgcgcgccgtgcggcgcgaattc
gaggccaaggagcaggacccggcgcggcgctggttcttcgatcctttcgcgcccgattgg
gtctccattccagacgccgcgcgcgaatcgggcgcgcatcgcgttccctgggagagcgtg
tccaccgatcagctcgcgcgcaatcccgaattctgggcgctcgcgccggatgcgcgctgg
catggattctccaatatggcggcgggattcgccatcaccgatccggccaagctcactctg
ctgacgccgggcttcgatcgagagaccggcgcctatgccgatcatggaatcccggcgccg
atcgtcgcgcaatatttgcgcgagaaccgcatcgtgccggagaagaacgacctcaactct
ctgctcttcctgctgacgccgggcgtcgaatccagcaaggcgggcacgctcgtctcctcg
ctcgtcgccttcaagcgcctgcatgacgataatgcgctgctgcaggacgtcattcccgaa
ttcgtcgcacgccgcgccgcgcgctacaggggcgtgcggctgcgcgatctctgcgccgat
atgcatcgcttcttcaaggaggcgaacgccagcgctctgcagcaggcgcaattccggcag
gagcatctccccgaaatggcgatgacgccgcgtgaggcatatctgcgcctcgtgcgcaat
gatgtggatttcctgccgatcgacgagatcgaaggccgcatagcgacgacgctcttcgtc
atctatccgccgggcattgcgacgatcgttccgggcgagcggctgggcgcgcaggcgcgg
cccatgctcgaatatttgcgcatgttcgaacgcagcgccaatctcttccccggcttcgat
tatgagatccagggcctctacaagcagtggaacggcgaggcgaagatgcggctctacact
tatgtggtgcaggaatga
DBGET
integrated database retrieval system