Methylosinus sporium: MSP5_002018
Help
Entry
MSP5_002018 CDS
T11225
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mspr Methylosinus sporium
Pathway
mspr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSP5_002018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspr03019
]
MSP5_002018
03110 Chaperones and folding catalysts [BR:
mspr03110
]
MSP5_002018
03029 Mitochondrial biogenesis [BR:
mspr03029
]
MSP5_002018
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mspr04147
]
MSP5_002018
Enzymes [BR:
mspr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSP5_002018
Messenger RNA biogenesis [BR:
mspr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSP5_002018
Chaperones and folding catalysts [BR:
mspr03110
]
Heat shock proteins
HSP60 / Chaperonin
MSP5_002018
Mitochondrial biogenesis [BR:
mspr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSP5_002018
Exosome [BR:
mspr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSP5_002018
Exosomal proteins of other body fluids (saliva and urine)
MSP5_002018
Exosomal proteins of breast cancer cells
MSP5_002018
Exosomal proteins of colorectal cancer cells
MSP5_002018
Exosomal proteins of bladder cancer cells
MSP5_002018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XWX54987
LinkDB
All DBs
Position
2098277..2099959
Genome browser
AA seq
560 aa
AA seq
DB search
MARNIRFGDPVRKKLLDGVDVLANAVGVTLGPCGRNVVIEHRASGLPPVATKDGATVAQA
VEAAGRMESVGITLVRQMATTVAKEAGDGSTTSVVLTHRVAAETRKALAAGMNPRDVSLG
MERAARAVEADLLRRSRRCDDRRSLAHVATLAAGGDEGIGEIVAEALEIAGDGGVVDVEL
GNGVTDEIESVEGMHWEQGYRSPYFMTDSARKIAELENPYILIYDRVINEFSELVPALEL
VRRRGGSLLVVAENIAEEALPGLLLNHIRKNLCSIAVKGPGYGDSRYEYLLDLAALTGGR
AIMEAFGEDISNVTIEHLGRARRVVVREDDTLVIGGEGDAAVIADRLASAKRQADWIVEG
DGSKGSPSGKRHELQNLQTRIKALSGRMATIRAGGLSDIVIKERMQRIENALNSARSAQN
DGVVAGGGVGLYRARAALAELRGDNLDQDHGVAIVRAALDEPIRRIAANAGVDADEFLFE
LRRSNDDFWGMDMRSGACGDLFAAGVIDPVRVTRLALRNAVATASSLMTVECAVTHIPPS
DPTFGFDARRAAETREDPRA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggccaggaatattcgcttcggcgaccccgttcgcaaaaagctgctcgatggagtcgac
gttctcgcaaacgccgtcggcgtgacgctcgggccatgcggccgcaatgtcgtcatcgag
catcgcgcctccggcttgccgccggtcgcgacgaaggacggcgccacagtagcgcaggcg
gtcgaagccgccggacgcatggagagcgtcggcataacgctggtgcgccaaatggcgacg
acggtcgccaaagaagcgggcgacggctcgacgacctctgtcgtgctgacgcaccgcgtc
gccgcggaaacgcgaaaagcgctcgccgccggcatgaatccgcgcgacgtctcgctcggc
atggagcgcgccgcgcgcgcggtcgaggccgaccttttgcgccgttcgcgtcgttgcgac
gatcggcgctcgctcgctcatgtcgcgactctcgcggccggcggcgatgaaggcataggc
gagatcgtcgcggaagcgctggagatcgccggcgacggcggcgtcgtcgatgtcgagctc
ggcaatggcgtgaccgacgagatcgaatccgtcgaaggaatgcattgggaacagggctat
cgctcgccctatttcatgaccgacagcgcgcgcaaaatcgccgagctcgagaatccctat
attctcatctacgatcgcgtcatcaatgaattttccgagctggtgccagcgctcgagctc
gtgcggcgtcgcggcggcagcctgctcgtcgtcgcggaaaacatagcggaggaagcgctt
cccggactcttgctcaatcacattcgcaagaatctctgctccatcgccgtgaaggggccg
ggctatggcgacagtcgctacgaatatcttctcgatctcgccgcgctcaccggcggccgc
gcgatcatggaggcgttcggcgaagatatttccaatgtcacgatcgagcatctcggccgc
gcgcgacgcgtcgtcgtgcgcgaggacgatacgctggtcatcggcggcgaaggcgacgcc
gccgtcatcgccgatcgcctcgcttcggcgaaacgtcaggccgattggatcgtcgaaggc
gacggctccaaaggctcgccgagcggcaagcgccacgagctccaaaatctgcagacgcgc
ataaaagccctgtccggcagaatggcgacgatccgcgccggcggcttgtcggacatcgtc
atcaaggagcgtatgcagagaatcgagaatgcgctcaattccgcccgctcagcgcagaat
gacggcgtagtcgccggcggcggcgtcggactctatcgcgcgcgcgccgctctcgcagag
ctgcgcggcgacaatctcgatcaggaccatggcgtcgccatcgtgcgcgccgcgctcgac
gagccgatacggcgcatcgccgccaacgccggcgtcgacgccgatgaatttttgttcgag
ctgcggcgatcgaatgacgatttctggggaatggatatgcgcagcggcgcttgcggcgat
ctcttcgccgccggcgtcatcgatcccgtgcgcgtcacgcgtctcgcattgcgcaacgcg
gtcgcgacggcctcctcgctgatgacggtggaatgcgcggtgacgcatattccaccgagc
gatccgacattcggattcgatgcgcgccgcgccgccgaaacgcgcgaagatccacgcgcc
tga
DBGET
integrated database retrieval system
