Methylosinus sporium: MSP5_002226
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Entry
MSP5_002226 CDS
T11225
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mspr Methylosinus sporium
Pathway
mspr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSP5_002226 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspr03019
]
MSP5_002226 (pnp)
03016 Transfer RNA biogenesis [BR:
mspr03016
]
MSP5_002226 (pnp)
Enzymes [BR:
mspr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MSP5_002226 (pnp)
Messenger RNA biogenesis [BR:
mspr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MSP5_002226 (pnp)
Transfer RNA biogenesis [BR:
mspr03016
]
Prokaryotic type
tRNA degradation factors
MSP5_002226 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
aRib
Motif
Other DBs
NCBI-ProteinID:
XWX55177
LinkDB
All DBs
Position
2312864..2315008
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AA seq
714 aa
AA seq
DB search
MFQIHREELDWAGRTLVLETGKIARQADGAVFASWGETTVLATVVSAKAPKPGQDFFPLT
VNYQEKAFAAGRIPGGYFKREGRPSERETLVSRLIDRPIRPLFPDGYRNDTQVIVTVLSH
DLENDPDILAMVAASAALTLSGIPFMGPIGGARVGYINGQLKLNPTIEEMKLSALDLVVA
GTSDAVLMVESEAQELSEDLMLEAVMTGHRGFQPVIDAIIRLAERAAKDPRDLDVVDKTE
VNAAVAAIAEAELRAAYKITVKQDRYAAVDAVKAKVYAGLLPEGGEAKFSKEHVAEAFHD
LQAKVVRWNILDDGIRIDGRDVKTVRPIVAEVGVLPRTHGSALFTRGETQALVVATLGTG
EDEQFVDSLEGTYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPAAA
EFPYTLRVVSEITESNGSSSMATVCGSSLALMDAGVPLKKPTAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTSDGVTSLQMDIKIAGITEEIMRVALGQARDGRLHILGEMSK
ALTTSRAELGEFAPRIETLKIATDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKVAS
SDGNSIKAAINWIKSIASDPEVGQIYEGTVVKTADFGAFVNFFGAKDGLVHISQLSKQRV
NKTTDVVKEGDKVKVKLLGFDDRGKVRLSMRVVDQQTGEDLEAKEKAEAANAGE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaatccatcgcgaagaactcgactgggcgggccgcacgctggtgctcgagacc
ggcaagatcgcccgccaggcggacggcgccgttttcgccagctggggcgagaccactgtg
ctcgcgaccgtcgtctcggccaaggcgcccaagcccggccaggacttcttcccgctgacc
gtcaattaccaggagaaagccttcgccgccggccgcattccgggcggctatttcaagcgc
gaaggccgccccagcgagcgcgagacgctggtttcccgcctcatcgaccggccgatccgc
cccttgttcccggacggctatcgcaatgacacgcaggtcatcgtgaccgtgctgagccat
gatctcgagaacgacccggatattctcgccatggtcgcggcttcggcggcgctgacgctc
tccggcattcccttcatgggcccgatcggcggcgcccgcgtcggctatatcaacggccag
ctcaagctcaatccgaccatcgaggagatgaagctctcggcgctcgatctcgtcgtcgcc
ggcacgtcggacgccgtgctgatggtggaatcggaggcgcaggagctctccgaggatctg
atgctcgaggcggtgatgaccggccatcgcggcttccagccggtgatcgacgcgatcatc
cgtctcgccgagcgcgccgccaaggacccgcgcgatctcgacgtcgtcgacaagaccgag
gtcaacgccgccgtcgccgccatcgccgaggcggagctgcgcgccgcctataagatcacg
gtgaagcaggaccgctacgccgccgtcgacgcggtgaaggccaaggtctacgccggcctg
ctgccggaaggcggcgaggcgaaattctccaaggagcatgtcgccgaggccttccacgat
ctgcaggccaaggtcgtgcgctggaacattctcgacgacggcattcgcatcgacggccgc
gacgtcaagaccgtgcgcccgatcgtcgccgaggtgggcgtgctgccgcgcacccatggc
tccgctttgttcacccgcggcgagacgcaggcgctggtcgtcgcgacgctgggcacgggc
gaggacgagcaattcgtcgactcgctcgaggggacctataaggagcgcttcctgctccac
tacaacttccctccctattccgtcggcgagacgggccgcatgggctcgcccggccgccgc
gagatcggccatggcaagctcgcctggcgcgccattcgcccgatgctgccggccgccgcc
gaattcccctatacgctgcgcgtcgtctcggagatcaccgagtccaacggctcctcgtcc
atggccaccgtctgcggctcctcgctggcgctgatggatgcgggcgtgccgctgaagaag
ccgacggcgggcatcgccatgggcctcatcctcgaaggtgagcgcttcgcggttctgtcc
gacattctcggcgacgaggatcatctcggcgacatggacttcaaagtggcgggcacgtcg
gacggcgtgacctcgctgcagatggacatcaagatcgccggcatcacggaagagatcatg
cgcgtggcgctgggccaggcgcgcgatggccgtctgcacatcctcggcgagatgtccaag
gcgctcaccacctcgcgcgccgagctcggcgagttcgcgccgcgcatcgagacgctgaag
atcgccaccgacaagatccgcgaagtgatcggcaccggcggcaaggtcattcgcgaaatc
gtcgagaagaccggcgccaagatcaacatcgaggacgacggcacggtgaaggtcgcctcc
tcggacggcaactccatcaaggcggcgatcaattggatcaagtcgatcgcctccgatccg
gaggtcggccagatctatgagggaaccgtggtgaagaccgccgacttcggcgccttcgtc
aatttcttcggcgccaaggacggcctcgttcacatttcgcaactctccaagcagcgcgtg
aacaagaccaccgacgtcgttaaggaaggcgacaaggtgaaggtgaagctgctcggcttc
gacgatcgcggcaaggtgcgcctctccatgcgcgtcgtcgatcagcagaccggcgaagac
ctcgaggccaaggaaaaggccgaagccgccaacgccggcgagtga
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