Methylosinus sporium: MSP5_002248
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Entry
MSP5_002248 CDS
T11225
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mspr Methylosinus sporium
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mspr01002
]
MSP5_002248
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mspr01011
]
MSP5_002248
Peptidases and inhibitors [BR:
mspr01002
]
Cysteine peptidases
Family C82
MSP5_002248
Peptidoglycan biosynthesis and degradation proteins [BR:
mspr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
MSP5_002248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
XWX55199
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All DBs
Position
2334919..2336205
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AA seq
428 aa
AA seq
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MIALAGAAAPAAIAAGDAYDGQAEWAQRYDADPRLTVSRSTTPILSTQTVAATEAAIAQL
QEIAARGGWPMVPAGQQLRLGSNSPAVSALRRRLIVSGDIGAEAGVSPVFDSYVEAAVRR
FQARHGVNATGVVSTQTFAALNVSAELRLRQLETNLVRLRSFSRDLGNRYVTANIPAATV
ETVENGAVVTHHTAGVGKIDRQSPVMQTKAIQVNFNPFWTVPASVIRKDLIPKMQADPNY
LADNHIRVYNKDGVELPPQQINWNSLEALNYKFRQDTGGDFNSLGVVRIDIANPYGVYMH
DTPAKGIFGDDFRFVSSGCIRLQNVRDYVAWLLKETPGWDRDHIDEAIRSGERIDVKISP
AVPVYWVYVTAWATPDGVMQFREDIYQRDGLGLTASIPQQSAPGPTPVASRQAARGSQLP
PVFGADEY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgctcgccggagccgccgcccccgcggccatcgccgcgggcgacgcctatgac
ggccaggccgaatgggcgcagcgctatgacgccgatccccggctcaccgtctcgcgctcg
acgacccccatcctctcgacgcagacggtcgccgcgacggaggcggccatcgcccagctt
caggagatcgccgcgcgcggcggctggcccatggtgccggccggccagcagctgcggctc
ggctccaacagcccggccgtctcggcgctgcgccggcgtctcatcgtctccggcgacatc
ggcgccgaggccggcgtgagcccggtcttcgactcttacgtcgaagccgcggtgcgccgc
ttccaggcgcgccacggcgtcaacgccaccggcgtcgtctcgacgcagaccttcgccgcg
ctcaacgtctccgccgagctgcgcctgcgccagctcgagaccaatctcgtgcgcctgcgc
agcttctcgcgcgatctcggcaatcgctatgtgacggccaacatccccgccgccacggtg
gagacggtcgagaacggcgccgtcgtcacccatcacaccgccggcgtcggcaagatcgac
cgccagtcgccggtgatgcagaccaaggcgatccaggtcaatttcaaccccttctggacc
gtgcccgcctccgtcatccgcaaggatctgatccccaagatgcaggccgatcccaattat
ctcgccgacaatcacatccgcgtctacaataaggacggcgtcgagctccccccgcagcag
atcaattggaactcgctcgaggcgctgaactacaaattccgccaggacacgggcggcgat
ttcaactcgctcggcgtggtgcgcatcgacatcgcgaatccttacggcgtctatatgcac
gacacgccggccaagggcattttcggcgacgacttccgcttcgtctcctccggctgcatc
cgcctgcagaatgtgcgcgactatgtcgcctggctgctgaaggagacgcccggctgggat
cgcgaccatatcgacgaggcgatccgctccggcgagcgcatagacgtgaaaatatccccc
gccgtgccggtctattgggtctatgtcaccgcctgggcgacgcccgacggggtgatgcag
ttccgcgaggatatttatcagcgcgacgggctcggcctcaccgcctccatcccgcagcaa
tccgcccctgggccgacgccggtcgcctcgcgtcaggccgcgcgcggatcgcagctgccg
ccggtgttcggcgcggacgagtattga
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