KEGG   Methylosinus sporium: MSP5_002761
Entry
MSP5_002761       CDS       T11225                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mspr  Methylosinus sporium
Pathway
mspr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mspr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSP5_002761 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mspr03021]
    MSP5_002761 (rho)
   03019 Messenger RNA biogenesis [BR:mspr03019]
    MSP5_002761 (rho)
Transcription machinery [BR:mspr03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     MSP5_002761 (rho)
Messenger RNA biogenesis [BR:mspr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     MSP5_002761 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB AAA_25 NACHT S1CSD-TOTE-2 ATPase_2 AAA Fungal_virus_P2_C Spore_III_AA AAA_14
Other DBs
NCBI-ProteinID: XWX55702
LinkDB
Position
2896403..2897671
AA seq 422 aa
MGEIKLQDLKSKSAAELLAFAEEHEVEGASLMRRQELLFAILKQFAGRDVEIVGEGVVEV
LQDGFAFLRSPDANYLAGPDDIYVSPSQIRRFGLRTGDTVEGMIRSPKEGERYFALLKVN
SINFEDPEKVRHKVPFDNLTPLYPDERLKLEIDDPTRKDLSARVIDLVAPIGKGQRALVV
APPRTGKTVLLQNIAQSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHRRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKVSDKRVFPA
IDITRSGTRKEELLVPSDILKKMYVLRRILNPMGTVDAIEFLLGKLRETPKGNASFFDSM
NT
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgggggaaatcaagcttcaggacctgaagtccaaatcggccgccgaattgctcgccttc
gcagaggagcatgaggtcgagggcgcgtcgctcatgcggcgccaggaactgctctttgca
atattgaagcaattcgccggtcgcgacgtcgagatcgtcggcgaaggcgtcgtcgaagtg
ctgcaggacggcttcgctttcctgcgttcgccagacgccaattatctcgccggcccagac
gatatttatgtgtcgccctcgcagattcgccgtttcggcctgcgcaccggcgacacggtc
gagggcatgatccgcagccccaaggagggcgagcgttatttcgcgcttctcaaggtcaat
tcgatcaatttcgaagatccggagaaggtgcggcacaaggtccccttcgacaatctgacg
ccgctctatcccgatgagcgtttgaagctcgagatcgacgatccgacgcgcaaggacctt
tccgcccgcgtcatcgatctcgtcgcgccgatcggcaagggccagcgcgctctggtcgtc
gcgccgccgcgcaccggcaagaccgtgctgttgcagaatatcgcgcagtcgatcaccacc
aatcatcccgagtgctatctgatcgttctgctgatcgacgagcgcccggaagaagtgacc
gatatgcagcgctcggtgaagggcgaggtggtctcctccaccttcgatgagccggcggtg
cgccatgtgcaggtcgccgaaatggtgatcgagaaagccaagcgcctcgtcgagcatcgc
cgcgatgtggtgatcctgctcgattcgatcacccgtctcggccgcgcctacaacacggtc
gtcccgtcctccggcaaggtgctgaccggtggtgtggacgccaatgctctgcagcggccg
aagcgcttcttcggcgccgcgcgcaatatcgaggaaggcggctcgctgaccatcatcgcc
acggcgctgatcgacaccggctcgcgcatggacgaggtgattttcgaggagttcaaggga
acgggcaattcggagattattctcgatcgcaaggtctccgacaagcgcgtcttcccggcg
atcgatatcacccgctccggcacccgcaaggaagagctgctggtgccctccgacatactc
aaaaagatgtatgtgctacgccgcatcctcaatccgatgggcacggtggacgccatcgaa
ttcctgctcggcaagcttcgcgagacgccgaagggcaacgccagcttcttcgattcgatg
aacacctga

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