Methylosinus sporium: MSP5_002826
Help
Entry
MSP5_002826 CDS
T11225
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mspr Methylosinus sporium
Pathway
mspr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSP5_002826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspr03019
]
MSP5_002826
Enzymes [BR:
mspr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSP5_002826
Messenger RNA biogenesis [BR:
mspr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSP5_002826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
XWX55767
LinkDB
All DBs
Position
complement(2966299..2967693)
Genome browser
AA seq
464 aa
AA seq
DB search
MASRGRRFRAHAAYFESYAVTNFADLGFAEVILRALAQEDYVTPTPIQAQAIPPLLQGRD
LLGIAQTGTGKTAAFALPILQRLLDERSRPAPNTARVLVLAPTRELAAQIADSFRAYARF
ARISVGVIVGGVAHGPQIRMLAGGVDVLVATPGRLLDHVASNHLRLDSTRTIVLDEADHM
LDLGFVVPIRKIVSRLPKDRQNLFFSATMPKEIASLADDMLRDPVTVRVTPAATTAERVA
QRVILVDGTAKRDVLLELFSDPNFSRAIVFTRTKRGADRVAQHLAVNAVGASAIHGNKSQ
NQRQRALDDFRAGRTRALVATDIAARGIDIDGVSHVVNFELPETAEAYVHRIGRTARAGA
TGAAVSLCDNSERSLLKQIERVTRQTLPITDRRSAPGAAAEADAARRAPPHEHRRTHQEA
GRAARHPGKPGEHGRPPQQQQRRRSGKPGGPRPDHNAPRSRASE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgcgggagacgttttcgcgcacatgcggcctatttcgaaagttacgcagtg
accaatttcgccgatctcggcttcgccgaggtcattctgcgcgcgctcgcgcaggaagat
tatgtgacgcccacgccgatccaggctcaggcgattcccccgctcctccagggccgcgac
ctgctcggcatagcgcagaccggcaccggcaagaccgccgctttcgctctgccgatcctg
caacggctgctcgacgagcgcagccgtcccgctcccaacacggcgcgcgttctggtgctc
gccccgacgcgcgagctcgcggcgcagatcgccgatagtttccgcgcctatgcgcgcttc
gcccgcatcagcgtcggcgtcatcgtcggcggcgtcgcccatggcccgcagatccgaatg
ctcgcaggcggagtcgatgttctggtggcgacccccggccgcctgctcgatcatgtcgcc
tccaatcatctgcggctcgattcgacgcggacgatcgtgctggacgaggccgatcatatg
ctcgacctcggcttcgtcgtccccattcgcaagatcgtctcgcgcctgccgaaggatcgg
cagaatctcttcttctcggccaccatgccgaaggagatcgcgtcgctcgccgacgatatg
ctgcgcgatcccgtcaccgtgcgcgtgacgccggcggcgacgacggccgagcgcgtcgcg
cagcgcgtgattctggtggacggaacggccaagcgcgacgttctgctggaactcttttcc
gatccgaacttctcgcgcgccatcgtcttcacgcgcaccaagcgcggcgccgatcgcgtg
gcgcagcatctcgccgtgaacgccgtcggcgcctcggcgattcacggcaacaaaagccag
aatcagcgccagcgcgcgctcgacgatttccgcgccggccgcacccgcgcgctggtcgcg
accgatatcgccgcgcgcggcatcgatatcgacggcgtctcccatgtggtgaatttcgag
ctgccggaaacggccgaggcctatgttcaccgcatcggccgcactgcgcgcgccggcgcg
acgggcgccgccgtctcgctctgcgacaatagcgaacgctcgctgctcaagcagatcgaa
cgcgtgacccgccagacgctgccgatcaccgaccgccgcagcgcgccgggcgccgcagcc
gaggcggacgccgcgcgccgcgcgccgccgcatgagcatcgtcgcacgcatcaggaggcc
ggccgcgccgcgcgccatccgggcaagcccggcgagcatggacgcccgcctcagcagcag
cagcgccgccgcagcggcaagcccggcggccctcggccggaccataatgcgccgcgctcg
cgcgcttccgagtaa
DBGET
integrated database retrieval system
