Methylosinus sporium: MSP5_003377
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Entry
MSP5_003377 CDS
T11225
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mspr Methylosinus sporium
Pathway
mspr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSP5_003377 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mspr03019
]
MSP5_003377 (groL)
03110 Chaperones and folding catalysts [BR:
mspr03110
]
MSP5_003377 (groL)
03029 Mitochondrial biogenesis [BR:
mspr03029
]
MSP5_003377 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mspr04147
]
MSP5_003377 (groL)
Enzymes [BR:
mspr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MSP5_003377 (groL)
Messenger RNA biogenesis [BR:
mspr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MSP5_003377 (groL)
Chaperones and folding catalysts [BR:
mspr03110
]
Heat shock proteins
HSP60 / Chaperonin
MSP5_003377 (groL)
Mitochondrial biogenesis [BR:
mspr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MSP5_003377 (groL)
Exosome [BR:
mspr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MSP5_003377 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MSP5_003377 (groL)
Exosomal proteins of breast cancer cells
MSP5_003377 (groL)
Exosomal proteins of colorectal cancer cells
MSP5_003377 (groL)
Exosomal proteins of bladder cancer cells
MSP5_003377 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
XWX56310
LinkDB
All DBs
Position
complement(3545709..3547346)
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDIRFSSDARDRILRGVEILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELADKFENLGAQLVREVASKQNDTAGDGTTTATVLAAAIAKEGAKAVAAGLNPQDLKRGI
DLAVEAVVADLKKNSKKVTSNDEIAQVGTISANGDSFIGQEIAKAVQKVGNEGVITVEEA
KSLDSETVIVEGLQFDRGYLSPYFITNAERLVAELEDPYILIHEKKLSTLQPLLPILEAV
VQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAQLEDIAILTGGQV
VSEDLGIKLENVTLPLLGRAKRIRIDKENTTIIDGAGEKKDIEARVAQIKAQVEEVTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVQEGISPGGGVALL
RAIAVLGDVKVANSDQKTGVEIVRKAIQAPARQIVDNAGGDGAVVVGKLLESTDYSFGYD
AQSGEYGDLVKLGIIDPTKVVRTALQDAASVAALIVTTEATITEQPKKDSGPALPPGGGM
GGMDF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacattcgtttttcctccgacgcgcgcgaccgtatcctgcgcggcgtc
gaaatcctcgccaatgcggtgaaggtcactctcggccccaagggccgcaacgtcgtcatc
gagaagagcttcggcgctccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgccgacaagttcgagaatctcggcgcgcagctcgttcgtgaggtcgcctccaag
cagaacgacaccgccggcgacggcaccacgacggcgaccgtgctcgccgcggccatcgcc
aaggaaggtgccaaggccgtcgcggccggcctcaatccgcaggatctgaagcgcggcatc
gacctcgccgtcgaggcggtcgtcgccgacctcaagaagaactccaagaaggtcacctcc
aacgacgagatcgcccaggtcggcaccatctcggccaatggcgacagcttcatcggccag
gagatcgccaaggcggtgcagaaggtcggcaatgagggcgtgatcacggtggaagaggcc
aagagcctcgactccgagaccgtcatcgtcgaaggcctgcagttcgaccgcggctatctt
tccccctatttcatcaccaacgccgagcgtctcgtcgcggagctcgaggacccctacatc
ctcatccacgagaagaagctgtcgacgctgcagccgctgctgccgatcctcgaggccgtc
gtgcagaccggcaagccgctgctcatcatcgccgaggacgtcgagggcgaggctcttgcc
acgctcgtcgtcaacaagctgcgcggcggcctgaagatcgcggccgtgaaggctccgggc
ttcggcgatcgccgcaaggctcagctcgaggacatcgccatcctcaccggcggtcaggtc
gtctccgaggatctcggcatcaagctcgagaacgtcacgcttcccttgctcggccgcgcc
aagcgcatccgcatcgacaaggagaacacgacgatcatcgacggcgccggcgagaagaag
gacatcgaggcccgcgtcgctcagatcaaggctcaggtcgaggaagtcacctcggactac
gaccgtgagaagctgcaggagcgtctcgccaagctcgcgggcggcgtcgcggtgatccgc
gtcggcggcgcgaccgaggtcgaggtgaaggagaagaaggaccgcgtcgacgacgcgctg
aacgccacccgcgccgcggtgcaggaaggcatctcgcccggcggcggcgtcgccctgctg
cgcgccatcgccgtgctcggcgacgtcaaggtcgcgaactccgatcagaagaccggcgtc
gagatcgtccgcaaggcgatccaggctccggcccgtcagatcgtcgacaacgccggcggc
gacggcgcggtcgtggtcggcaagctgctcgagtccacggactacagcttcggctatgac
gctcagtccggcgaatatggcgatctggtgaagctcggcatcatcgacccgaccaaggtc
gtccgcacggctctgcaggacgcggcttccgtcgcggcgctcatcgtcaccaccgaggcg
acgatcaccgagcagccgaagaaggacagcggcccggctctgccgcccggcggcggcatg
ggcggcatggatttctga
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