Methylosinus sporium: MSP5_003382
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Entry
MSP5_003382 CDS
T11225
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
mspr Methylosinus sporium
Pathway
mspr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MSP5_003382 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mspr03000
]
MSP5_003382 (nifA)
Transcription factors [BR:
mspr03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSP5_003382 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
Mg_chelatase
AAA_2
AAA
bpMoxR
TIP49
DUF7310
AAA_3
Motif
Other DBs
NCBI-ProteinID:
XWX56315
LinkDB
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Position
complement(3549927..3551699)
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AA seq
590 aa
AA seq
DB search
MGYEAGSSMNTAQARAFDPSESALVGIYEISKLLASPNRLEKTLAGVLALLSSFLDMRHG
LIALLDSHGDPEVVVGSGWSEGNAKKFFEHLPERAVGQIVATKMPLVVENVMASPLFEGT
DLSEWGPTDGQPFSLIGVPIKEGDSVVGTLTVDRVYSDRSSVRFDHDVRFLTMIANLVGQ
TLRLHKLIARDRDRLMQEKARLEKGDRVAHVEARLEGIKGIVGDSPAVRAVVEKIRVVAK
AKSTVLLRGESGTGKELFAAAIHNLSPRQSKPFVKLNCAALPESVLESELFGHERGAFTG
AAALRKGRFELADGGTLFLDEIGDITPAFQAKLLRVLQEGEFERVGGTRTMKVDVRFVCA
TNRNLEEAVQKGEFRADLYYRISVVPIFLPPLRERRGDLAPLANEFLRRFNNEQNVHLTL
SESAMEVLNECSFPGNIRELENCVYRTATLARNDAIVDKDFSCRNDGCLSSVLWNGSRET
SIGGLHPPSFTPLPIVSKPQAPPPPARPAVARAPVVEEPEAPVAPAQPAACPGAENCTVI
ETDHRSDRDKLIEAMEQAGWVKAKAARLLGLTPRQIGYALQKYDIPVKKF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggatacgaagctggaagcagcatgaacacggctcaggctcgcgcgttcgacccgagc
gaatctgctctcgtcggaatctatgaaatttcgaaactgttggcgtcgcccaaccggctc
gagaaaacgctggcgggggtgctggcgctgctgtcgagctttctcgacatgcggcacggc
ctcatcgccctgctcgattcacatggggacccggaagtggtcgtcggatcgggctggagc
gaaggaaacgccaagaaattcttcgaacatcttcccgagcgcgcggtcgggcagatcgtg
gcgaccaaaatgccgctggtggtcgagaatgtcatggcctcgccgctgttcgagggcacg
gatctctccgaatggggcccgacggacgggcagcccttttcgctgatcggcgtgccgatc
aaggaaggcgactccgtcgtcggcacattgacggtcgatcgcgtctatagcgaccgctca
tccgtgcgcttcgatcacgacgtccgcttcctgacaatgatcgccaatctggtgggccag
acgcttcggctccacaagctgatcgcccgtgatcgcgatcggctgatgcaggagaaggcc
aggctcgagaagggcgaccgggtcgcgcatgtggaggcgcggctggaaggcataaaagga
atcgtcggcgacagcccggcggtcagagcggtcgtcgagaagattcgggtggtcgcgaaa
gccaaatcgaccgtgctgctgcggggcgagtccggcactggcaaagagctgttcgcggcg
gcgatccacaatctctcgccgcggcagagcaagcccttcgtcaagctgaattgcgcagcc
ctgcccgaaagcgttctggaatccgagcttttcgggcatgagcgaggcgccttcaccggc
gccgccgccttgcgcaaaggccgcttcgagctcgccgacggcggcactctgttcctggac
gagatcggcgacatcacgcccgcattccaggcgaagctgctgcgcgtgctgcaggaaggc
gaattcgagcgcgtcggcggcacgcggacgatgaaggtcgatgtgcgcttcgtctgcgcc
accaaccgcaatcttgaggaagcggtgcagaagggcgaattccgcgccgatctctactat
cggatcagcgtggtgccgattttcctgccgccgctccgcgagcgaaggggcgatctcgcg
ccgctcgccaatgaattcctgcgccgcttcaataatgagcagaatgtccatctgacgctt
tccgagtcggcgatggaagtgctcaatgaatgcagcttcccgggcaatattcgggagctc
gagaattgcgtctatcgcactgcgacgctggcgcgcaacgacgcgatcgtagacaaggat
ttctcctgtcgcaacgacggctgcctgtcctccgtgctctggaacggctcgcgtgaaacc
tcgatcggcgggctccatccgccgagcttcacgcctttgccgatcgtgtccaagccgcag
gctccgccgccgcccgcgcggcccgcggtcgcgcgggcgcctgtcgtcgaggagccggag
gctcccgtcgccccggcgcaacccgccgcctgtcccggcgccgagaactgcaccgtcatc
gagacggatcatcgttccgatcgggacaagctgatcgaggccatggaacaagccggctgg
gtgaaggccaaagcggctcggcttctcgggctcaccccccggcaaatcggctatgcgctg
caaaaatatgatatccctgtaaagaagttttga
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