Methylosinus sporium: MSP5_003553
Help
Entry
MSP5_003553 CDS
T11225
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
mspr Methylosinus sporium
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mspr03009
]
MSP5_003553
Enzymes [BR:
mspr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MSP5_003553
Ribosome biogenesis [BR:
mspr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MSP5_003553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
XWX56484
LinkDB
All DBs
Position
3703440..3705593
Genome browser
AA seq
717 aa
AA seq
DB search
MTDKKPERPARRKDGGDQPPRRRIPAKKPASAEPDAVASAFEGERIAKVMARAGACSRRD
AEIWVTEGRVSVNGRVLDSPAFNVQEGDRIEVDGQPLAEREPTRLFLFHKPAGLVTSAKD
PEGRETVFGFLEERFPDLPRLVSVGRLDINTEGLLLLTNDGGLARTLELPATGWTRRYRV
RAHGEIDQARLDELKKGVTVDDVDYAPIDAKLDRVQGANVWISMALREGKNREIKRVLEH
LGLDVNRLIRISFGPFQLGELEEGVVEEVRLKTLREQLGKGLAELAGVDFSSSRRDSDEP
PHIAAEEARQRAKTRTRKHVTTLRAEREEARGKGPRARIERAATSDRKGRAVPVEKIVPV
RRAEEPATTRNARRFRAERAEGEERPARVAGERKERFERGERAPRREGEGRPPRREGGAA
RPRAGERTERFDRGERRGSSFGAGDGPRRERAPRREGEGRPPRREGMPARAASGERTERF
DRGERRGSSFGAGDGPRRERAPRREGEGRPPRREGMPARAASGERTERFDRGERRGSSFG
AGDGPRRERAPRREGEGRPPRRDGAEQRPRAERTERFDRGERRGSSFGASDGPRRERAPR
REGEERPPRREGAAARAPSGERFERGERKSSGERKSFAGKGSGKRFDSGDAPRGERAPRK
AGEGRSPRRDGDARPPSGERRGPPRSGAGKGPGRGGPAGKGPGKGPRKPGGAPRKPR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaaaagccagaaagacccgcccgccgtaaggacggcggcgaccagccgccg
cgtcgccgcatcccggccaagaaaccggcatcggccgagcccgacgccgtagccagcgcc
ttcgagggcgagcgcatcgccaaggtcatggcgcgcgccggcgcttgctcgcgccgcgac
gccgagatttgggtcacggaagggcgcgtctccgtcaatggccgcgtgctggacagcccc
gccttcaatgtgcaggagggcgaccgcatagaggtggacggccagccgctcgccgagcgt
gagccgacgcgcttgtttctgttccacaagccggccggcctcgtcaccagcgccaaggac
ccggaagggcgcgagaccgtcttcggcttcctagaggagcgctttcccgatctgccgcgc
ctcgtcagtgtcgggcggctcgacatcaacacggaaggcctgctgctgctgaccaatgac
ggcggtctcgcgcgcacgctcgagcttccggcgacgggctggacgcgccgctatcgcgtg
cgcgcccatggcgagatcgaccaggcgcgattggacgaattgaagaagggcgtcaccgtc
gacgatgtcgattacgcgccgatcgacgccaagctcgatcgcgtgcagggcgccaatgtc
tggatcagcatggcgctgcgcgagggcaagaatcgcgagatcaagcgcgtgctcgagcat
ttggggctcgacgtcaatcggctgattcgcatctccttcggcccatttcagctcggcgag
ctggaggagggcgtcgtcgaggaggtgcggctgaagaccttgcgcgagcaactcggcaag
ggcttggccgagctcgccggcgttgatttttcgtcgtcccgccgcgactcggacgagccg
ccgcatatcgccgccgaggaggcgcgccagcgcgccaagacgcgcacgcgcaagcatgtg
acgaccttgcgcgccgagcgtgaggaagcgcgcggcaaaggcccgcgcgcccgcatagag
cgcgccgccaccagcgaccgcaaaggccgcgccgtgccggtggagaagatcgtgcccgtg
cgccgcgccgaggagccggcgacgacgcgcaacgctcgccgcttccgcgccgagagggcc
gagggggaggagagacccgcgcgcgtcgccggagagcgcaaggagcgattcgagcggggc
gagcgtgcccctcggcgcgagggcgaaggacgtccgccgcgtcgcgagggaggtgctgcg
cgtccgcgcgccggcgagcggaccgagcgtttcgatcgcggcgagcgtcgcggctcgagc
tttggcgctggcgacgggccgcgccgtgaacgcgcgccgcgtcgcgagggcgagggtcgc
ccgccccggcgtgaaggaatgccggcgcgcgctgcgtcgggcgagcggacggagcgtttc
gatcgcggtgagcgtcgcggctcgagcttcggcgccggcgatgggccgcgccgcgagcgc
gcgccgcgtcgtgagggcgagggtcgcccgccccggcgtgaaggaatgccggcgcgcgct
gcgtcgggcgagcggacggagcgtttcgatcgcggtgagcgtcgcggctcgagcttcggc
gccggcgatgggccgcgccgcgagcgcgcgccgcgtcgtgagggcgagggtcgtcctccg
cgtcgggatggcgcggagcagcgtccgcgcgccgaacggacggagcgtttcgaccgcggc
gagcgtcgcgggtcgagcttcggcgctagcgatgggccgcgccgcgagcgcgcgccgcgt
cgtgagggcgaggagcgtccgccgcgtcgcgagggagcggccgcccgtgcgccctctggc
gagcgtttcgagcgtggcgagcgtaagagttccggtgagcgcaagagcttcgcaggcaag
ggctccggcaagcgtttcgactccggcgacgcgccgcggggcgagcgcgcgccgcgcaag
gcgggtgagggccgctcgccgcgtcgtgacggggatgcgcgtccgccgtcgggcgagcgt
cgcggtccgccgcggagcggcgcgggcaaagggccgggcagaggcgggccggctggcaaa
ggtcctggcaaggggccgcgcaagcccggcggcgcgccgcgcaagccgcgctag
DBGET
integrated database retrieval system
