Methylosinus sporium: MSP5_003718
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Entry
MSP5_003718 CDS
T11225
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mspr Methylosinus sporium
Pathway
mspr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mspr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSP5_003718 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mspr03400
]
MSP5_003718 (ung)
Enzymes [BR:
mspr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MSP5_003718 (ung)
DNA repair and recombination proteins [BR:
mspr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MSP5_003718 (ung)
Prokaryotic type
MSP5_003718 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XWX56645
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All DBs
Position
3876672..3877337
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AA seq
221 aa
AA seq
DB search
MNKPVQIDESWKLRLSAEFEQPYFDALRQFVRGEYARGAVYPPAKQIFRAFDECPFDAVE
VVILGQDPYHGRGQANGLCFAVGRDIPPPPSLQNIFKEIESDLGRPASRDPDLSRWARQG
VLLLNATLTVRDSAAGSHQGKGWERFTDAAVQALSREREGIVFLLWGNYARQKGAGVDRS
RHLVLESAHPSPLSARGFFGCRHFSKANGYLVAQGRTPIDW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacccgtgcagatagacgagagctggaagctgcgcctttcggcggaattcgag
cagccctatttcgatgctctgcgccaattcgtgcgcggggaatatgcgcgtggggcggtc
tatccgccggccaagcagattttccgcgccttcgacgaatgccctttcgacgccgtggaa
gtggtgatcctcggccaggatccctatcacggccgcggccaggccaatggcctgtgcttc
gccgtcggccgcgacattccgccgccgccttcgctgcagaacatcttcaaggagatcgag
agcgacctcggccggcccgcctcgcgcgatcccgatctctcgcgctgggcgcggcagggc
gtgctgctgctcaacgccacgctcaccgtgcgcgacagcgccgccggctcgcatcagggc
aagggctgggagcgcttcaccgacgccgccgtgcaggcgctctcgcgcgagcgcgaggga
attgtcttcctgctctggggcaattacgcgcggcagaagggcgcgggcgtcgatcgctcg
cggcatctcgtgctcgagagcgcgcatccctcgccgctgtcggcgcgcggcttcttcggc
tgcaggcatttttccaaggctaacggctatctggtcgcgcaggggcggacgccaatcgac
tggtga
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integrated database retrieval system
