Marinobacter salinus: BKP64_01945
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Entry
BKP64_01945 CDS
T04766
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
msq
Marinobacter salinus
Pathway
msq02024
Quorum sensing
msq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKP64_01945
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKP64_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msq03019
]
BKP64_01945
03036 Chromosome and associated proteins [BR:
msq03036
]
BKP64_01945
Messenger RNA biogenesis [BR:
msq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BKP64_01945
Chromosome and associated proteins [BR:
msq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BKP64_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AOY87041
UniProt:
A0A1D9GHM1
LinkDB
All DBs
Position
407015..407266
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AA seq
83 aa
AA seq
DB search
MSKGHSLQDPYLNALRKERIPVSIFLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPARNVRIPQQAPGGEGESED
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcactcgttacaagacccttacctcaatgccctgcgcaaggaacgcatt
ccggtttctatctttctggtcaatggtatcaagcttcagggccaggttgaatcttttgac
cagttcgtgattttgctgaaaaatactgtcagccaaatggtctacaagcatgctatttcc
accgtggtcccagctcgtaatgttcgcattccgcagcaggcaccgggaggagaaggcgag
tctgaagactga
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