Marinobacter salinus: BKP64_02210
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Entry
BKP64_02210 CDS
T04766
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
msq
Marinobacter salinus
Pathway
msq02020
Two-component system
msq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BKP64_02210
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BKP64_02210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msq03021
]
BKP64_02210
Transcription machinery [BR:
msq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BKP64_02210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
GP67
Motif
Other DBs
NCBI-ProteinID:
AOY90114
UniProt:
A0A1D9GRD3
LinkDB
All DBs
Position
complement(463327..464853)
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AA seq
508 aa
AA seq
DB search
MKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLENSEEDDEPEASS
NEDSGNRDESSTEASAEPASESASDWDETENGPDWTSENEIPDNIPDDLPVDTAWDDIYQ
SAPASTARNDDENDHDFETRNSPTETLQDHLEWQLNLTPLNERDRAIAHALMDAVNERGY
LTSPLEEIHAGLLDENEEDPLELDEVEAVLHRLQHFDPPGVFARDLQECLLIQLNQLPPD
TPWLAQARLVITHYINLLGNRDYAQLLRRSRLKEDQLREVLALITGLNPRPGDVLDRAEP
DYVIPDVIVRKHNGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYLRDQLQEAKWF
IKSLQSRNETLLKVATRIVEHQQGFLDEGEEAMKPLILSDIAQAVEMHESTISRVTTQKY
MHTPRGIFELKYFFSSHVSTNEGGECSSTAIRAMIKKLIAAETPKKPLSDSKIAAMLGEQ
GIKVARRTVAKYREAMHIPPSNERKRLV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctccttacagttaaagctgggtcaaagcctgaccatgacgccccagctgcaa
caggcgatccggctactgcagctctccaccctcgaccttcaacaggaaatccagcaggca
ctggaatccaaccccatgctggagaactccgaggaggatgacgagccggaagccagctca
aacgaagacagcggaaatcgtgacgagagcagcaccgaagccagtgccgagccagcctcg
gagtctgcctctgactgggatgaaacagaaaatggtccggactggacttcagaaaatgag
attccggacaatattcccgatgatctgcccgtcgatactgcctgggatgatatctaccag
tctgccccggcatcgaccgcccggaacgatgacgaaaacgatcacgacttcgaaacccgc
aactcccccaccgaaacccttcaagatcaccttgagtggcaactgaacctgacgccgtta
aacgaacgggaccgggccattgcccacgcgctgatggatgcggtgaatgagcggggctac
ctgaccagccctctggaagaaatccacgcgggcctgcttgatgagaatgaggaagatccg
ctggaactggacgaggtggaggcggtcctgcaccggttgcagcacttcgatcctcccggc
gtgtttgcccgggacctccaggaatgcctgctcatccaactgaatcagttgcctccagac
acaccatggctggcccaggcccggttagtgattacccactatatcaatctcctgggtaat
cgtgactacgctcagttactgcgccgaagccgcttgaaagaagatcagctccgagaggtt
ctggcgctcattaccggcctaaaccctcgcccgggtgatgtcctcgaccgcgccgaaccc
gactacgtcatacccgacgttattgtccgcaaacataatggtcgctggcgcgtcgagctg
aatcctgaaattgccccccgcattcgtgtcaatgcaagctatgcttctcttatacggcgg
gccgatagcagcgcggacaacacctacctgcgggatcagcttcaagaggcaaagtggttt
atcaaaagcctgcaaagccgaaacgaaaccctgctgaaggtggcgacacgtatcgtggaa
caccaacagggatttctggatgaaggtgaagaggccatgaagcccctgatcctctcggac
attgcccaggcggtagagatgcatgaatcgacgatctcccgtgtgaccacacagaagtac
atgcatactccccgggggatttttgagcttaaatatttcttctccagccatgtcagcacc
aacgaggggggggaatgctcctcaacagcaatccgcgcaatgatcaaaaagctgattgcg
gcagaaactcccaaaaagccgttgagtgacagtaaaattgcagccatgctaggggaacag
ggtatcaaggtggcgagacgcaccgtggccaagtatcgggaagcgatgcatattccgccc
tcgaatgagcggaagcgactggtttag
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