KEGG   Marinobacter salinus: BKP64_02210
Entry
BKP64_02210       CDS       T04766                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
msq  Marinobacter salinus
Pathway
msq02020  Two-component system
msq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:msq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BKP64_02210
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BKP64_02210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msq03021]
    BKP64_02210
Transcription machinery [BR:msq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BKP64_02210
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID GP67
Other DBs
NCBI-ProteinID: AOY90114
UniProt: A0A1D9GRD3
LinkDB
Position
complement(463327..464853)
AA seq 508 aa
MKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLENSEEDDEPEASS
NEDSGNRDESSTEASAEPASESASDWDETENGPDWTSENEIPDNIPDDLPVDTAWDDIYQ
SAPASTARNDDENDHDFETRNSPTETLQDHLEWQLNLTPLNERDRAIAHALMDAVNERGY
LTSPLEEIHAGLLDENEEDPLELDEVEAVLHRLQHFDPPGVFARDLQECLLIQLNQLPPD
TPWLAQARLVITHYINLLGNRDYAQLLRRSRLKEDQLREVLALITGLNPRPGDVLDRAEP
DYVIPDVIVRKHNGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYLRDQLQEAKWF
IKSLQSRNETLLKVATRIVEHQQGFLDEGEEAMKPLILSDIAQAVEMHESTISRVTTQKY
MHTPRGIFELKYFFSSHVSTNEGGECSSTAIRAMIKKLIAAETPKKPLSDSKIAAMLGEQ
GIKVARRTVAKYREAMHIPPSNERKRLV
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgaaagcctccttacagttaaagctgggtcaaagcctgaccatgacgccccagctgcaa
caggcgatccggctactgcagctctccaccctcgaccttcaacaggaaatccagcaggca
ctggaatccaaccccatgctggagaactccgaggaggatgacgagccggaagccagctca
aacgaagacagcggaaatcgtgacgagagcagcaccgaagccagtgccgagccagcctcg
gagtctgcctctgactgggatgaaacagaaaatggtccggactggacttcagaaaatgag
attccggacaatattcccgatgatctgcccgtcgatactgcctgggatgatatctaccag
tctgccccggcatcgaccgcccggaacgatgacgaaaacgatcacgacttcgaaacccgc
aactcccccaccgaaacccttcaagatcaccttgagtggcaactgaacctgacgccgtta
aacgaacgggaccgggccattgcccacgcgctgatggatgcggtgaatgagcggggctac
ctgaccagccctctggaagaaatccacgcgggcctgcttgatgagaatgaggaagatccg
ctggaactggacgaggtggaggcggtcctgcaccggttgcagcacttcgatcctcccggc
gtgtttgcccgggacctccaggaatgcctgctcatccaactgaatcagttgcctccagac
acaccatggctggcccaggcccggttagtgattacccactatatcaatctcctgggtaat
cgtgactacgctcagttactgcgccgaagccgcttgaaagaagatcagctccgagaggtt
ctggcgctcattaccggcctaaaccctcgcccgggtgatgtcctcgaccgcgccgaaccc
gactacgtcatacccgacgttattgtccgcaaacataatggtcgctggcgcgtcgagctg
aatcctgaaattgccccccgcattcgtgtcaatgcaagctatgcttctcttatacggcgg
gccgatagcagcgcggacaacacctacctgcgggatcagcttcaagaggcaaagtggttt
atcaaaagcctgcaaagccgaaacgaaaccctgctgaaggtggcgacacgtatcgtggaa
caccaacagggatttctggatgaaggtgaagaggccatgaagcccctgatcctctcggac
attgcccaggcggtagagatgcatgaatcgacgatctcccgtgtgaccacacagaagtac
atgcatactccccgggggatttttgagcttaaatatttcttctccagccatgtcagcacc
aacgaggggggggaatgctcctcaacagcaatccgcgcaatgatcaaaaagctgattgcg
gcagaaactcccaaaaagccgttgagtgacagtaaaattgcagccatgctaggggaacag
ggtatcaaggtggcgagacgcaccgtggccaagtatcgggaagcgatgcatattccgccc
tcgaatgagcggaagcgactggtttag

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