Marinobacter salinus: BKP64_02540
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Entry
BKP64_02540 CDS
T04766
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
msq
Marinobacter salinus
Pathway
msq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BKP64_02540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msq03400
]
BKP64_02540
Enzymes [BR:
msq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BKP64_02540
DNA repair and recombination proteins [BR:
msq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BKP64_02540
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKP64_02540
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BKP64_02540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOY87147
UniProt:
A0A1D9GHM3
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All DBs
Position
535672..537117
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AA seq
481 aa
AA seq
DB search
MIRSFYWHDYETFGVDPVHDRPSQFAGVRTDADLNIIEDPLVIYCKPADDYLPSPEACLI
TGITPQKALEEGYPEAEFIAQINEAFSQPGTCVVGYNSLRFDDEVTRHTLYRNLRDPYAR
EWQNGNSRWDIIDMVRLTYALRPEGINWPKKEDGSPSFRLEELTVANGIAHESAHDAMSD
VEATLSVAKLIKEKQPKLFDFVLQNKDKHSARAMLDTGAMKPVFHISAKYPAIRGCCALV
APVADHPTNKNLVIVYDLREDPSELLAATPDQIRERVFTSQAQLGEGVTRFPLKGVQLNK
CPVLAPATMLSTLSPERLAELELDGDTLRANLALLRKAPDLPARIAEAFDHPHEGDLTDP
DEQLYAGGFISKADREKLNWVLQQPVETLGEQEVQFDDDRLQVLLFRYRARNYPDTLTGE
DMERWEEFRSQRLMHPKKGWRSLEAYANELQRLAADPELTPEKQHILEDLHLYGESLIPY
I
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttgatccgctcgttctactggcatgactacgaaaccttcggtgtcgatccggttcatgac
cgcccctcccagtttgccggtgtaagaaccgatgcggacctgaatattatcgaagatccc
cttgttatctactgcaaaccggccgacgactatctgccgtcccccgaagcctgtctgatt
accggtattactccacagaaagcgctggaggagggctatcccgaggccgagtttatcgct
cagattaatgaggccttcagtcagccgggtacctgtgtggtgggctataacagcctgcgt
tttgatgatgaagtgacccgccataccctctatcgcaatttgcgtgatccttatgcgcgg
gaatggcagaacggtaattcccgatgggacatcattgatatggtgcgccttacctacgcg
cttcgaccggaggggattaactggccgaaaaaagaggatggcagcccgagtttccggttg
gaagagctgacggtggcgaatggcatcgcccatgaaagcgctcacgatgccatgtcggat
gtcgaggccacgctttcggtggctaagctgatcaaggagaagcagcccaagttatttgat
tttgtgctgcagaacaaagacaagcactccgcccgggcaatgctggacaccggggccatg
aagccggtttttcatatttcggcaaaatacccggccatccggggctgctgcgcgctggtg
gctccggtggctgatcacccgacgaacaaaaacctggtaatcgtgtatgacttgcgtgag
gaccccagtgaactgctcgcggccacgcctgaccagattcgtgagcgggtgtttacttcc
caggcgcagttgggtgagggggtaacccggtttccgttgaaaggtgtgcagctgaataag
tgcccggtactggccccggccactatgctttcaaccctgtcgccggagcgactggcagag
ctggagctggacggtgacaccttgcgagccaaccttgcgcttctgagaaaagcacctgac
ctgccagccaggatcgccgaagcctttgaccatccccatgagggcgacctgaccgacccg
gatgagcagctttatgctggcggctttatcagtaaggcggaccgggagaagctgaactgg
gtgctacagcagccggtggaaactttgggtgagcaggaggttcagtttgacgacgaccgg
ctacaggtgctgctgttccggtatcgcgcacggaattatcccgacacgctcacgggcgag
gatatggagcgttgggaggaattccgttcgcaaagactgatgcacccgaagaagggctgg
cggtctctggaggcctatgccaatgagttgcagcgattggcggccgatcccgagctgacg
ccggagaagcagcacattctggaggatctgcatttgtacggagaatctttaattccgtat
atctga
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