Marinobacter salinus: BKP64_08115
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Entry
BKP64_08115 CDS
T04766
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
msq
Marinobacter salinus
Pathway
msq03030
DNA replication
msq03430
Mismatch repair
msq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKP64_08115
03430 Mismatch repair
BKP64_08115
03440 Homologous recombination
BKP64_08115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msq03032
]
BKP64_08115
03400 DNA repair and recombination proteins [BR:
msq03400
]
BKP64_08115
Enzymes [BR:
msq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKP64_08115
DNA replication proteins [BR:
msq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BKP64_08115
DNA repair and recombination proteins [BR:
msq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BKP64_08115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
T3SS_ATPase_C
Motif
Other DBs
NCBI-ProteinID:
AOY88137
UniProt:
A0A1D9GKH3
LinkDB
All DBs
Position
complement(1763928..1767410)
Genome browser
AA seq
1160 aa
AA seq
DB search
MPQTFIHLRVHSEYSMVDGLVRVKPLVSRVAELGMPAVGLTEQSNMCSLVRFYKAATGAG
VKPIIGGDLWLENPDEPDNPFRLTLLARNNDGYLNLTEIISLGYTEGQRFGKPIIQRKWL
EDRPDGLIMLSGGKLGDIGKALLAEKPELARERAAYWMNLYPGACYLELQRTGRAGDEDC
LHLSVQLAQDLGLPVVATNDVHFLDAEDFEAHEARVCIGESRTLDDPRRDRRFSDQQYLR
SAEEMIELFADIPEAIENTVEIARRCSVKVRMGEYFLPNYPIPEGMTMDEYFRKVSEDGL
EERLAKTLSRDDPDYEEKRAAYYKRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYAQLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIAYVA
EKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPFEPGMTLDKAIEQEP
QLKDFLEQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSLVT
QFDKGDVEDAGLVKFDFLGLRTLTIIDWALKMINPRRESRDLPPLDINEIPLEDVPSFDM
LKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHGRQ
PMSFPHPDYQYEGLKPVLEPTYGVILYQEQVMQIAQVMAGYSLGNADMLRRAMGKKKPEE
MAKQKQFFLDGCEQNGIDKTLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYP
AEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSDFTFTVNDEGQIVYGLGAIK
GLGEGPIQSIVEGRGDGEPYQDIFDFCRRVDLKKVNKRAMEALIRSGAMDKLGAGRAQLM
ASIDKAVQQADQQSRNESVGMMDMFGEMLENGEGGDPYADVAGVREWPEKQRLKGEKDTL
GLYLTGHPFDEYEKEVRRFVRSSIADLKPNKSPQRVAGLVVAQRTMKTRTGSTMCFITLD
DRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVGTARQQF
SRGLKLALSADQLQNGLLEKLDTTLRPFRCEGSPVWIEYSSPEARTRIELGDSWRVQPDD
NLLLELRYLVGDQSVELVYD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagacttttattcacctccgcgtgcactctgaatactccatggtcgatggactg
gtgcgggttaagcctcttgtcagccgtgtagccgagctgggcatgccagcggtgggtctt
accgagcagtccaacatgtgctcgctggttcgtttctacaaagccgcaaccggcgccggg
gtaaagcccatcatcggcggggatctgtggctggagaacccggacgagccggacaatccg
ttcaggctgacattgctggccagaaataacgatggctacctgaatctcacagagatcatc
tcgctgggttacacggaagggcagcggtttggaaagccgatcattcagcgcaaatggctc
gaagatcggccagatggtctgatcatgctgtctggcggaaaactcggagatatcgggaag
gccctgctggcagagaagcctgagcttgcccgagaacgggctgcttactggatgaatctt
tatccgggtgcctgttacctggaactgcagaggacaggtcgtgcaggtgacgaagactgc
ctgcacctgagcgtgcagctggcccaggatctggggcttccggttgtcgccaccaatgat
gtgcacttcctggatgcagaggactttgaggcccatgaggcccgggtctgcattggcgag
agccggaccctggatgatccgcgccgggaccggcggttcagtgaccagcaatacctgcgc
agtgccgaggaaatgatcgagctgtttgccgacattccggaggccattgaaaatactgtg
gaaattgcccgccgctgttccgtaaaggtgcgaatgggcgaatactttttgccgaactat
cccatcccggaagggatgacaatggacgagtattttcgcaaggtgtccgaggacgggctg
gaagaacggctcgccaagactctgagcagggatgatccggattacgaggaaaaacgggcg
gcctattacaagcgtctgaactttgagctggatattattatccagatggggtttccgggt
tacttcctcatcgttatggatttcatcaaatgggccaagaacaacggcgtgccggtaggg
cccggccggggttccggtgccggttcgctggtggcctacgcccagttgatcaccgatctg
gacccgcttgagtatgacctgctgtttgagcgctttctgaaccccgagcgggtatccatg
cccgactttgacgttgatttctgcatggaaggccgggaccgggttatcgcctatgtggct
gagaaatatggtcgtgaagcggtttcccagattattactttcggaaccatggctgccaag
gccgtggtccgggatgtggcgcgggtacagggtaagtcttacggcctggccgacaagctg
tccaaaatgatcccgttcgagccgggcatgacgctcgataaggccattgagcaggaaccg
cagctcaaggattttctggaacaggacgaagaagcccaggaaatctgggaaatggcgctg
aagctggaaggtgtttgccgtaatgccggtaaacacgccggtggcgttgtgatcgcgccc
accaagattaccgatttctcacccctgtattgcgatgatgagggtggcagcctcgtgacc
cagtttgacaagggtgacgtggaagatgccggcctggtgaagttcgactttctgggtctg
aggaccctgacgatcatcgactgggcactgaagatgatcaatccgagacgggaaagccgg
gatctgcctcctctcgatatcaacgagattccgctggaagatgttccgtctttcgacatg
ctgaagaaagcggaaaccactgccgtattccagctggaatcccgaggcatgaaagacctg
attcgtcgcctgcagccggactccctggaagatatgattgcactggttgccctgttccgg
ccaggcccgctgcaatccggcatggttgacgacttcatcgatcggaagcacggtcgtcag
cccatgtctttcccgcatcctgactatcaatatgagggcctgaagcccgtattggagcct
acgtacggggttatcctttaccaggagcaggtcatgcagatcgcccaggtgatggccggc
tacagtctcggcaacgccgacatgctgcgccgcgcgatgggcaagaagaagcctgaggaa
atggccaagcagaaacagttttttctggatggctgtgagcagaatggcatcgacaagacc
ctggcggaaaacatcttcgacctggtagagaagtttgccggttacggcttcaacaaatcg
cattcggccgcatacgcactggtttcctaccagaccctgtggctgaaggcgcattacccg
gccgagtttatggctgcggtgctcaccgccgacatgcagaacaccgacaaggtggtcacg
ctggtggaagagtgcaggaacatgaagcttgatcttctggttccggatgttagccgctct
gatttcaccttcaccgtaaatgacgaaggacagattgtttacggactcggtgcaatcaag
gggctgggcgaaggtccgatccagagcattgtggagggaaggggcgacggagagccctat
caggatatcttcgatttctgccgcagggtggacctgaagaaagtgaacaaacgggctatg
gaagccctgattcgttccggcgcgatggataagcttggagcaggccgggcgcagctcatg
gccagcatcgacaaggccgtgcagcaggcagatcagcagtctcggaacgaatccgtgggc
atgatggatatgttcggggaaatgcttgaaaacggtgaaggcggcgatccttatgccgat
gtggcgggagttcgggagtggcccgaaaagcagcggctcaaaggtgaaaaggataccctg
gggctgtacttgaccggtcacccgttcgatgagtatgaaaaagaagttcggcgcttcgtt
cgctcctccattgccgacctgaaacccaacaagtcgccgcaacgagtggcgggcctggtg
gtggctcagcgcaccatgaagacccgaaccggttccaccatgtgttttatcacccttgat
gaccgcagtgcccggattgaagcaacactgttttcggaagccttttttgaaaaccgggaa
ctgctgcagtccgatcaggtgattgtcgtggaaggccaggtcagtcatgacgattattcc
ggccagatgaagatgcgggtaagttcggtgatggacgttggcaccgcgcgccagcagttc
agtcgtggactgaagctggcactgagcgcagaccagcttcaaaacggacttctggagaag
ctggacaccacgcttcggccatttcgttgtgagggtagtccggtctggatagagtacagc
agtccggaggcccggacccgaatagagcttggggattcctggcgcgtgcagcctgacgat
aatcttctgttggaactcaggtatctcgtgggcgaccagtccgtagaactggtctatgat
tga
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