Marinobacter salinus: BKP64_10370
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Entry
BKP64_10370 CDS
T04766
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
msq
Marinobacter salinus
Pathway
msq03410
Base excision repair
msq03430
Mismatch repair
msq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKP64_10370
03430 Mismatch repair
BKP64_10370
03440 Homologous recombination
BKP64_10370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msq03400
]
BKP64_10370
DNA repair and recombination proteins [BR:
msq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BKP64_10370
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BKP64_10370
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BKP64_10370
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
AOY88536
UniProt:
A0A1D9GLL0
LinkDB
All DBs
Position
complement(2266822..2268555)
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AA seq
577 aa
AA seq
DB search
MTPKKILRRPQPENTPAWGQSLPPLLRRLYAARGVTSDEQLSYTLKHLASPMELRGIDRA
VTLLAEAIEQQQRVLILGDFDADGATSTAVAMLGLSMLGLQSIDFRVPSRFSDGYGLTPG
IIERLKDEGELPDLLITVDNGISAIEGVKAARNMGMSVVVTDHHLAGETLPDADAIVNPN
QPGCPFLSKNAAGVGVMFYVLTALRKHLRETDRLPLPEPNLGSLLDLVALGTVADVVPLD
HNNRIFVEQGLRRIRQGEARPGILALLEVAGRDHTAISSTDLGFVVGPRLNAAGRLDDMS
IGIACLLADSPDEARRLARELDSFNRERRTIEKDMKAQAQELLASMSLDLEGLPWGLALF
DPDWHQGVIGILAARIREQTHRPTIAFAGDDNGEDIKGSARSIPGLHIRDVLAAVDARHP
GMMKKYGGHAMAAGMTLARENLDAFSDAFDKAVRDTLKAEDLEAAITTDGPLDLNELSLD
TAALLKNAGPWGQHFPEPVFDGEFRVVSQRIVGENHLKLVLQPAEGGGIIDGIAFNTGPE
VPDFTRSGARVVYKPDSNTFRGRTSLQLLIDYLEPLS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgaaaaagatcctgcgtcgcccccaaccggagaacacgccggcctgggggcag
agcctcccaccgttacttcgtcgcctctatgcagccagaggcgtgacctccgatgagcag
ctgagttataccctcaaacacctggcctctcccatggagctccggggtattgatcgtgcg
gtaacgttgctggccgaggccatagaacaacagcagcgggttttgattctgggtgatttt
gatgccgatggcgccaccagtacggcggtcgccatgctgggattgtccatgctgggcctg
caaagtattgatttccgcgttcccagccggttctcggacggctatggcctgacaccggga
atcatcgagcgcctgaaagatgaaggcgagctgccagacctgctgattactgtggacaat
gggatctccgctatagagggtgtgaaagcagcccgcaatatgggtatgagcgtggttgtg
actgaccatcacctggcgggtgaaaccttgccggatgccgatgccatcgttaatcccaat
caacccggttgcccctttctgagcaagaatgccgctggggttggcgtcatgttttatgtg
cttacagccttgcgcaagcatctccgcgaaacagatcgcctgcctctgccggagccgaat
cttgggtcgcttcttgatctggtggcactgggaacagttgcagatgtggtacccctggac
cataacaaccgcatttttgtcgaacagggcctgcgccgtattcgtcagggtgaggcccgt
ccaggcattctggctttgttggaagtggctggccgggaccacacggccatcagctcaaca
gatctcggattcgttgtcggcccccgcctgaacgccgctggtcgtctggatgacatgagc
attggtattgcctgccttctggcagacagtccggatgaagcccgccggctggccagggag
cttgacagctttaatcgtgagcgtcgcaccattgagaaggatatgaaggcccaggcccag
gagttgctggcgtcgatgtcgcttgatcttgagggcttaccttgggggctggcgctgttc
gatccggactggcaccagggcgtcattgggattctggctgcaagaatacgtgaacagact
catcggccgactattgcattcgccggtgacgataacggcgaggatatcaagggatcggca
cgctccatccccggtcttcatattcgcgatgtgctggccgccgtggatgcccgccacccg
ggtatgatgaaaaaatacggggggcatgcgatggctgccggtatgaccctcgcccgtgaa
aatctggatgctttttccgacgcttttgataaggcggttcgggataccctgaaagctgag
gacctggaggcggcaattacgaccgatgggccattggacctgaatgagctgagtctggac
acggctgcactgctcaagaatgcggggccctgggggcagcattttcccgagccggtgttt
gacggtgaattccgggtggtcagtcagcgtatcgtcggcgagaatcacctcaagctggtg
ttgcagccagctgaaggtggcggaatcattgatggcatagctttcaataccgggccggaa
gtgcctgattttacgcgttctggcgcacgggtggtttacaagccggactccaatacgttc
cggggccgcacgagtcttcagttgctgatcgactatcttgaacccctttcctga
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