Marinobacter salinus: BKP64_12475
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Entry
BKP64_12475 CDS
T04766
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
msq
Marinobacter salinus
Pathway
msq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKP64_12475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msq03021
]
BKP64_12475
03400 DNA repair and recombination proteins [BR:
msq03400
]
BKP64_12475
Enzymes [BR:
msq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKP64_12475
Transcription machinery [BR:
msq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BKP64_12475
DNA repair and recombination proteins [BR:
msq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BKP64_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AOY88923
UniProt:
A0A1D9GMR4
LinkDB
All DBs
Position
complement(2683439..2687653)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNLLKSQNQSKEFDAIRIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVALASVRRERMGHIELASPVAHIWFLKSL
PSRIGLMLDMTLRDIERVLYFESFIVIDPGMTTLERGQLLNDEQYYEALEEFGDEFDARM
GAEAVKQLLEDIDLQAEVDALREEIPQTNSETKIKKFSKRLKILEAFLYSGNKPGDMVMT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGTNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPY
LRLHQCGLPKKMALELFKPFIFSKLEHRGLATTIKAAKKMVEREEGVVWDILDEVIREHP
IMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNVLSPANGEPIIVPSQDVVLGLYYMTRERKNAPGEGMTFADVKEAHRAYGAG
KVDLQARVKVRVKEVAIAEDGSRTEAYNIVDTTVGRALLFDIVPDGLSFELVNKPMVKKA
ISNLINTCYRDAGLKDTVIFADQLMYMGYHYATVSGISIGFNDFEIPPEKYELVDAASQE
VKDIETQYASGLLTQGEKYNKVIDIWSRANDKVSKAMMERLAKEQVIGPDGQPVKGEDGE
YVMQESFNSVYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQY
FISTHGARKGLADTALKTANSGYLTRRLVDVSQDLVVTEEDCGTDEGLLMTPHIEGGDVV
VPLGDRVLGRVTARDAFTPTDKDNAVVTAGTLLDEKTVETLERAGVDEVWVRSAITCETR
HGICSKCYGRDLARGHRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRASAVDNIQ
VKHGGTVRLHNLKSIEKSDGSLVVISRSSALAIADDQGREREWYKLPYGAVLSVKHGDAV
EAGVAVAKWDPHTHPIIAEAGGTAKFVNMDQGITVRTQTDELTGLSTMEVIDPKERPAAG
KDIRPAIQLIDEKGEEVELPGGGTAIFFLPANALVTMANGARIELGDVVARIPQESSKTR
DITGGLPRVADLFEARRPKESSILAEISGMVSFGKETKGKKRLVITPKDSDAYEVLIPKH
RQLNVFEGETVEKGEVISDGPSNPHDILRLLGVVELAKYITNEIQDVYRLQGVVINDKHI
EVIVRQMLRKVEITDPGDTTLLSGDQVEITQVLEENESANAGDKEPARFDRLLLGITKAS
LATESFISAASFQETTRVLTEGAVTGKRDYLRGLKENVVVGRLIPAGTGLAYHAERRRKR
ELEAQGVTAADVEEALSAELNRES
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttgctgaatcttctcaagagccagaaccaaagcaaggaatttgatgccatc
cgaataggcctggcatcgcctgacatgattcgctcgtggtcttttggtgaagtgaagaag
cctgagactatcaattaccgtaccttcaaaccggagcgtgacggtcttttctgtgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaaatacaagcgcctgaagcat
cgcggtgttatctgcgagaagtgtggcgtggaagtggcactggcgagcgttcgccgtgag
cgtatgggtcatattgaactggccagtccggttgcccatatctggttcctgaaatcactg
ccgtctcgcatcggtttgatgctggacatgacgctgcgcgatatcgagcgtgtgctgtac
ttcgagtccttcattgtgattgacccgggtatgaccacgctggagcgcggtcagctgctg
aacgacgagcagtattacgaagcgcttgaagagtttggcgacgagtttgatgcccgtatg
ggcgccgaggccgtaaagcaactgcttgaagatattgatctgcaggcggaagtggatgcg
ctgcgtgaagaaattccgcagaccaattccgaaaccaaaatcaagaagttcagcaagcgt
ctgaaaattcttgaggccttcctgtattccggtaacaagccgggcgacatggtgatgacc
gttctgccggttctgccgccggatttgcgcccgttggttccgctggacggtggtcgtttt
gcgacctcggatttgaacgatctttaccgtcgggtaatcaaccggaacaaccgtctcaag
cgcctgctggagctgaatgctccagacattatcgtgcgcaacgaaaaacggatgcttcag
gaagcggttgatgcgttgttggacaacggccgtcgcggccgtgccatcaccggcactaac
aagcgtccgctgaagtctctggcagacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctgggcaagcgcgtagactactccggtcgttccgtgatcgtggttggtccctac
ctgcgtctgcaccagtgtggtctgcccaaaaagatggctctggagctgtttaagccgttt
atcttctccaagcttgagcaccgcggtctggcgaccacgatcaaggcggccaagaagatg
gttgagcgcgaagaaggcgtggtctgggacatcctggacgaggtcattcgtgaacacccg
atcatgctgaaccgtgcgccgaccctgcaccgtctgggtattcaggcgttcgagccggta
ctgatcgaaggcaaggctatccagttgcacccactggtctgcgcggcctacaacgccgac
tttgacggtgaccagatggcggttcacgtaccgctgaccctggaagcgcagctcgaagcc
cgtgcgttgatgatgtccaccaacaacgtactgtcaccggccaacggcgaaccgatcatt
gtaccgtcccaggacgtggttctgggtctgtactacatgacccgggagcgcaagaacgcg
cccggtgaaggcatgaccttcgcggacgtcaaagaggcgcaccgggcctacggtgctggc
aaggttgatcttcaggcgcgagtcaaagtgcgcgtgaaggaagttgcaattgccgaagac
ggctcgcgtactgaagcctataacattgttgataccacggtcgggcgcgccctgctgttt
gatatcgtgccggatggcctctcgtttgagctggtcaacaagccgatggtcaagaaggca
atctcgaacctgatcaacacctgttatcgcgatgccggtttgaaagacaccgtaatcttc
gcagaccagctcatgtacatgggctatcactatgcgacggtatccggtatctccatcggc
tttaacgatttcgagattcccccggagaagtacgaactggttgacgccgcttcccaggaa
gtaaaagacatcgaaacccagtacgcgtccggtctgctgacccaaggcgagaagtacaac
aaggttatcgatatctggtcccgcgccaacgacaaggtctccaaggcgatgatggagcgg
ctggccaaagagcaggtcattggtccggatggtcagccggtgaagggtgaggatggcgag
tatgtcatgcaggaatccttcaactcggtctacatgatggcggattccggtgcccgaggc
tccgcggcccagattcgtcagctcgctggtatgcgtggtctgatggccaagccggatggc
tccatcatcgaaacgccgatcactgcgaacttccgtgagggtctgaacgtacttcagtac
ttcatctcgactcacggtgctcgtaagggtctggcagatacagcgctgaagactgcgaac
tccggttacctgactcgtcgtctggttgacgtttcccaggatctggtggttaccgaggaa
gattgcggtaccgacgaaggcctgctgatgaccccgcacatcgaaggtggcgacgttgtt
gtgccgctgggcgaccgtgttctgggtcgtgtaacggcccgtgatgcgttcactccgacc
gacaaggacaacgcagttgtcactgctggcaccctgcttgacgagaaaactgttgagacc
ctggaacgggccggtgtggatgaagtgtgggtacgttcagcgattacctgcgaaacccgt
catggtatctgttccaagtgttatgggcgtgatctggcgcgtgggcaccgggttaacgtt
ggtgaggcagtgggcgttatcgctgcacagtccatcggtgagccaggtacacagctgacc
atgcggactttccacatcggtggtgctgcaagccgggcctctgctgtagataatatccag
gtcaagcatggtggtacggttcgtttgcataacctgaaatccatcgagaagagcgacgga
tctcttgtggttatctctcgctcctctgcgctggccatcgctgatgaccagggtcgtgag
cgtgaatggtataagctgccatacggtgccgtgctctctgtgaagcatggtgatgcggtt
gaggcaggtgttgcggtggccaagtgggatccgcacacgcatccgattattgcggaagcg
ggcggaaccgcgaagtttgtcaacatggaccagggcatcaccgtccgtacccagaccgac
gagctgaccggcctgtcgaccatggaggttattgacccgaaagagcgcccggcagctggc
aaggacatccgtccggctatccagttgatcgatgaaaagggagaagaagtcgagctgcca
ggtggtggtacagcgatcttcttccttccggcaaatgccctggtcacaatggccaacggc
gcccggatcgaactgggtgatgttgtcgcccggattccgcaggaaagctccaagacccgg
gacattaccggtggtctgccaagggttgccgacctgttcgaggcacgtcgcccgaaagag
tcttctattcttgccgaaatcagcggcatggtctcctttggtaaggaaaccaagggcaag
aagcggctggtgatcactccgaaggatagtgacgcttacgaagtgctgattccgaagcac
cgtcagctgaacgtcttcgaaggtgaaacggtcgagaagggtgaggtgatttccgacggt
ccgtccaacccgcatgacattctacgtctgctgggtgtggtcgagttggccaagtacatt
accaacgagattcaggacgtttatcgtctgcagggtgttgtcatcaacgataaacacatt
gaggttatcgttcgtcagatgttgcggaaggttgaaataacggacccgggcgacacaacc
ctgctctccggcgaccaggtggaaattactcaggtgctcgaggaaaacgagagcgccaac
gcgggagacaaggagccggcacggttcgatcgtctgctgctgggtatcaccaaggcgtca
ctggcaaccgagtcgttcatttccgcggcttcgttccaggagaccacccgtgtactcacc
gaaggtgcagtgaccgggaagcgggattacctgcgcggtctgaaagaaaacgttgtggtt
ggtcgactgattccggctggaaccggtctggcttaccatgccgagcgtcgtcgcaaacgt
gaactggaagcccagggcgtgactgcggcagacgtggaagaggctctgagcgccgagctc
aaccgcgaaagctga
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integrated database retrieval system
