Marinobacter salinus: BKP64_13790
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Entry
BKP64_13790 CDS
T04766
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
msq
Marinobacter salinus
Pathway
msq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKP64_13790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msq03019
]
BKP64_13790
Messenger RNA biogenesis [BR:
msq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BKP64_13790
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AOY89152
UniProt:
A0A1D9GND4
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All DBs
Position
complement(2953314..2954714)
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AA seq
466 aa
AA seq
DB search
MTPDHNDLWFLPLGGTGEIGMNLNLYGHDGQWLMVDCGVTFPKPGRLAADGTVHHQGEPP
VQMADPAFIADRREQLAGLIITHAHEDHVGAVPYLWPLLQCPVYASRFTAEILRRKLAEF
DLLHRVQIIVVETGDCRQIGPFNVQWLALTHSIPDPNALMIRTDIGNIFHSGDWKLDDHP
LVGHGYSRKTFTDLAEEGVTAMVCDSTNATVAGHSVSEAALHEGLLSAVKAAEGRVIVAC
FGSNIARLHTLARIGRETGRYMGLLGRSLINMSGAARAAGLWDAADELINPSHLGYLPRE
EVLAVATGSQGEPRTALRRLAAGNHPDIELEAGDTVIFSARAIPGNEEAIEMLISKLRAL
GVAVVTAEDSIVPIHASGHPAQEELQAMYQWIQPNIAIPVHGEAEHMETHADIAKRWGVP
RALVGRNGDLFMIRPVPGMRRQVAGTGRLGWKSGELVPVLPGIDHY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagatcataacgacctctggtttttgccgcttggtggcaccggagaaatcggt
atgaacctcaacctctacggccacgatggtcagtggctgatggtggattgtggcgtcacc
tttccgaaacccgggcgccttgcggcagacggtaccgtgcatcatcagggtgagccgcca
gtccaaatggcggacccggcgttcattgccgaccggcgcgagcaactggcaggcctgatc
attactcatgcccatgaggatcatgtcggagcggtgccctacctctggccgctgttgcag
tgtccggtttatgccagccggtttacggcggaaatactgcgccggaagctggcagagttc
gatttgctgcatcgggtgcagatcattgtggttgagaccggagactgtcgccagattggc
cccttcaacgtgcagtggctggcactgacccactccatccccgaccccaacgccctgatg
attcgcaccgacatcgggaatatcttccacagtggcgactggaagctggatgaccacccc
ctggtgggacacggctactcccggaaaacgttcacagacctggcggaagaaggtgtgact
gccatggtctgtgattccaccaatgcgacggtggccggccattcggtctcagaagcggcc
ctgcacgagggtttgttgagtgcggtcaaggcagccgagggtcgtgtgattgtggcctgc
tttggcagtaacattgcccgtttgcacacccttgcacgaatcgggcgtgaaactggccgt
tatatgggattgctgggacgttcgctgatcaatatgagtggtgccgcccgcgccgcgggg
ttgtgggatgcagcggacgagctgattaatccctctcatctggggtatctgccgagagag
gaagtgctcgcggtggcaactggcagtcagggagagccccggaccgcactgagacgactg
gcagccggcaatcacccggatattgagctggaggcgggagatacggtgatcttcagcgcc
cgggcgatccccggcaacgaggaggccattgagatgctgatcagcaaactcagggcgctt
ggtgtagcggtggtcaccgccgaggattccattgttcccattcacgcttccggacaccct
gctcaggaagaactccaggccatgtaccagtggattcagccgaacatagcgatcccggtg
catggcgaggccgagcatatggagacccatgccgacatcgccaaacgctggggtgtcccc
cgagctctggtgggccgaaacggagacttgttcatgatccgcccggtaccgggcatgcgc
aggcaggttgccgggaccgggcggctcgggtggaaatccggggagctggttccggtgtta
cccggtatcgatcattactga
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