Marinobacter salinus: BKP64_18335
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Entry
BKP64_18335 CDS
T04766
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msq
Marinobacter salinus
Pathway
msq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKP64_18335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msq03019
]
BKP64_18335
03016 Transfer RNA biogenesis [BR:
msq03016
]
BKP64_18335
Enzymes [BR:
msq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BKP64_18335
Messenger RNA biogenesis [BR:
msq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BKP64_18335
Transfer RNA biogenesis [BR:
msq03016
]
Prokaryotic type
tRNA degradation factors
BKP64_18335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_2
Motif
Other DBs
NCBI-ProteinID:
AOY89964
UniProt:
A0A1D9GQZ1
LinkDB
All DBs
Position
3976640..3978760
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AA seq
706 aa
AA seq
DB search
MDLKPVKKSFELGGKTVTLETGRIARQATGAVLVTIDDVSVLGTVVGAKEPKPGQGFFPL
TVNYTEKTYAVGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVVLTVMS
ANKTQNPDIAAMLAASAALAISGIPFDGPIGASRVAFTNERGYFLNPTYEELETSLLDMV
VAGTEDAVLMVESEAKGLTEDQMLGGVLFAHQEMQVAVNAIKEFAAEIGKPRWDWQVEAE
NTELLSAIKGEFSGAIEEAYSIRDKMERYARLGEIKTAAVEKFAGEEEGQPSGEEVKKYF
GKIEKTVVRQQVIDGKPRIDGRDNKTVRPIEIEVGVLPSTHGSALFTRGETQAIVTATLG
TARDMQIIDALEGERKDPFLFHYNFPPYSVGEAGRMGTPGRREVGHGRLAKRGIAAVMPT
IEEFPYTIRAVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEGEKFAV
LTDILGDEDHLGDMDFKVAGTKDGITALQMDIKINGITDEIMELALEQAHGARLHILGEM
NKVIAESRPELSARAPSITTIKINPDKIRDVIGKGGATIRSICDETGASIDLDDDGNVKI
YADNQEAAQAAVNRVKEITAEIEVGAIYKGRVERIVDFGAFVNILPGKDGLVHISQISER
RIENVTDELSEGQEVLVKVLDVDNRGRVKLSMKEVQEGEQPTDFSA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggatctgaaacctgtaaagaaatcatttgagctcggcggcaagaccgtcactctcgaa
accggccgtattgcccgtcaggctactggcgctgttctcgttaccatcgatgatgtgtcc
gtgctgggcacagttgtcggtgccaaggaaccaaagccggggcagggctttttcccgctg
acggttaactacaccgagaaaacctacgctgtaggcaagatccccggtggtttcttcaag
cgtgaaggccgtccttctgaaaaagaaaccctgacgtcgcgtctgatcgaccgtccgatc
cgtccactgttccccaatggctacatgaacgaagttcaggttgtcctgaccgttatgtct
gccaacaagacccagaatccggatattgccgcaatgctggctgcgtctgctgcgctggcg
atttccgggatcccgttcgacggccccattggtgcgtcccgtgttgctttcaccaatgag
cgcggttacttcctgaacccgacttatgaagagcttgaaacctcgctgctggacatggtc
gttgccggtactgaagacgcggttctgatggttgaatccgaagccaagggcctgaccgaa
gaccagatgctgggcggcgttctgttcgcacaccaggaaatgcaggttgcggttaacgcg
atcaaggaatttgctgccgagattggcaagccgcgctgggactggcaggttgaagcagaa
aataccgaactgctgagcgcgatcaagggcgaattctccggtgcgattgaggaagcctac
agcatccgcgacaagatggagcgctacgctcgtctgggcgagatcaagaccgcagcagtt
gaaaagtttgcgggcgaagaagaaggccagccttccggggaagaggtcaagaagtacttt
ggcaagatcgagaagacagttgttcgccagcaggttattgacggcaagccacgtattgat
ggccgcgacaacaagactgttcgtccgatagaaatcgaagtgggcgttctgccgagcacg
cacggttccgcgctgtttacccggggtgaaacccaggcaatcgttactgcaacgctgggg
accgcccgtgacatgcagatcattgatgcccttgaaggtgagcgcaaggatccgttcctg
ttccactataacttccctccgtactcggttggtgaagctggccgcatgggtactccaggc
cgtcgcgaggttggtcacggtcgtctggcgaagcgcggtattgccgcagtgatgccgact
atcgaagagttcccgtacaccatccgtgcggtttccgagatcaccgagtccaacggttcc
agttccatggcttccgtatgcggttccagccttgcgctgatggacgcaggcgttccgctg
aaggcgccagttgccggtattgccatgggtctggtcaaggaaggcgagaaattcgctgtt
ctgaccgacatcctgggtgacgaggatcacctgggcgacatggacttcaaggtcgctggc
accaaagacggtatcactgccctgcagatggacatcaagatcaacggcattaccgacgag
atcatggaacttgccctggagcaggctcacggagcgcggctgcatattcttggcgagatg
aacaaggttattgccgagtcgcgtccagagctgtctgcccgtgcaccgagcatcaccact
atcaagatcaacccggacaagatccgtgacgttatcggtaaaggtggtgcgactatccgc
tctatctgtgacgagaccggcgcgtctatcgatctggatgacgatggcaatgtgaagatt
tacgcggataaccaggaagcggctcaggctgcggttaaccgggttaaggaaattaccgcg
gaaatcgaggttggtgcgatatataagggtcgtgttgagcgcattgtggacttcggtgcg
ttcgtcaacatcctgcctggtaaggatggtctggtacacatctcccagatttccgagcgc
cgtatcgagaacgtgactgacgagctgagcgaaggtcaggaagttctggttaaggttctg
gatgtggacaaccgtggtcgcgtcaagctgtccatgaaggaagttcaggaaggcgagcag
ccgactgacttctctgcctga
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