Marinobacter salarius: AU15_01580
Help
Entry
AU15_01580 CDS
T03593
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msr
Marinobacter salarius
Pathway
msr03420
Nucleotide excision repair
msr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AU15_01580 (uvrD)
03430 Mismatch repair
AU15_01580 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msr03400
]
AU15_01580 (uvrD)
Enzymes [BR:
msr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AU15_01580 (uvrD)
DNA repair and recombination proteins [BR:
msr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AU15_01580 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AU15_01580 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AHI30542
UniProt:
W5YMV1
LinkDB
All DBs
Position
343086..345251
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDALNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRIAWLMQMDKVPPTGILAV
TFTNKAAKEMRYRIEQMMQIPARGLWFGTFHGIAHRLLRAHYQDAGLPENFQVLDSDDQL
RLIKRVMRELQIDESRWPPKQAQWFINGQKDEGLRAEHIQENPGDHFTSTMLTVYRQYEK
LCNLSGLVDFGELLLRSHELWLHRPELLSHYQSRFQQILVDEFQDTNTIQYAWLQILAGN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNARMVRLEQNYRSTQLILKAANAVIAN
NQGRLGKELWTDGPDGEPISLYAAFNEQDEANYIADTIGSWVNEGNLRSESAILYRSNAQ
SRVLEESLIRQGIPYRVYGGLRFYDRQEIRNAIAYLRLVHYRRDDAAFERVVNIPARGIG
AKSLADMRAFATERSISLWESAERLLEAGQVKGRAKTGLQSFMGIIERLTEMVDDASLHG
LMKTTLELSGLKDYHASEKGEKGQARVENLEELVNALSDYEVEEGVDPLSEFIAQAALDA
GEAQAEANEDCVQLMTLHSAKGLEFPLVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMQKLVLTYAESRRLYGQEKFHALSRFVREIPGDCIQEVRLRNTVSRPAMMARPNEG
LFSQEPDVGTGFSLGQRVRHPKFGEGIVMNSEGSGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcccacattatcgacgccctgaacgacgcccaacgtgaggcggtgacggcc
cagaatgaccacttgctggtgctggccggcgcaggcagtggcaagacgcgggtgctggtg
caccggatcgcctggttgatgcagatggacaaggtgccgcccaccggcatcctggcggtg
accttcaccaacaaagcggcgaaggagatgcgctaccgcatcgagcagatgatgcagatt
ccggctcggggcctctggttcggcacgtttcacggcattgcgcaccggctgctcagggcc
cattaccaggacgctggcctgccggagaacttccaggtgctggatagcgacgaccagctg
cggctgatcaagcgcgtgatgcgggagcttcagatcgacgagagccgctggccgcccaaa
caggcgcagtggtttatcaacggtcagaaagacgaagggctgcgggcggaacacatccag
gaaaatccgggcgatcatttcacgagcaccatgctgacggtttatcgccaatacgagaag
ctctgcaacctgagtgggctggtggatttcggggagctgttgttgcgatcccacgagctg
tggctgcatcgcccggagttactgagccactatcagagccgcttccagcagatcctggtg
gacgagttccaggacaccaataccatccagtacgcctggctgcagatcctggccgggaac
cgtgtgccgctgacggtggtgggcgacgacgaccagtccatatacggctggcggggcgcg
aagatcgaaaacatccagcagtaccagcgggactttcccaacgcccggatggtgcgattg
gaacagaattaccgctccacgcaactgatcctgaaagccgccaacgcggtgattgccaac
aaccagggccggttgggcaaggaactctggaccgatggcccggatggcgagcccatcagt
ttgtatgcggccttcaacgagcaggacgaagccaactacatcgccgacaccattggtagc
tgggtcaacgagggtaacctgcgcagcgagtcggccattctttaccgctccaacgcccag
tcccgggtgctggaagaatccctgatccgccagggcattccctaccgcgtttatggcggc
ctgcgattctacgaccgtcaggaaattcgcaacgccatcgcttatctgcgtctggtgcac
tatcgccgggacgatgcggcgtttgagcgcgtggtgaatattcccgcccgtggtattggc
gccaagagcctggcggatatgcgcgcgttcgccacggagcgcagtatctccttgtgggag
tctgccgagcgtttgttggaggctgggcaggtgaagggccgcgccaaaaccggtctgcaa
tccttcatgggcatcatcgaacgcctgacggagatggtggacgatgcctcattgcatggt
ctgatgaagacaacactggagttgagcggcctcaaggattaccacgccagtgaaaagggt
gagaaggggcaggcgcgggtggagaacctggaagaactggtgaatgccctgtcggattat
gaggtggaagagggcgttgatccgctgtcggaattcatcgcccaggcagcgctggacgcc
ggcgaggctcaggcggaagcgaatgaggactgcgtgcagcttatgacccttcattccgcc
aagggcctggagtttccgctggtattcctggccggtgtggaggaaggcctgtttccccac
agtatgtcgttggaagaaccggggcggatggaagaagagcggcgcctggcctatgtgggc
attacccgggccatgcaaaagctggtgcttacttacgccgaatcccgccgtttgtacgga
caggagaaattccacgcgctgtcgcgctttgttcgcgagattcccggggactgcatccag
gaagtacggttgcgcaatacggtgagccgtccggccatgatggcccggcccaatgagggc
ctgttcagccaggaacctgacgttggcacgggtttcagcctgggccagcgggtacgccat
ccaaagtttggcgagggtatcgtgatgaactccgagggctctggccaccatacccgggtg
caggtgaactttgatgagggggctaagtggctggtgttggcctacgcgccgttggaggca
tgctga
DBGET
integrated database retrieval system
