Marinobacter salarius: AU15_06050
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Entry
AU15_06050 CDS
T03593
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msr
Marinobacter salarius
Pathway
msr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AU15_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msr03400
]
AU15_06050
Enzymes [BR:
msr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AU15_06050
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AU15_06050
DNA repair and recombination proteins [BR:
msr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AU15_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AHI31057
UniProt:
W5YPB3
LinkDB
All DBs
Position
complement(1275171..1275995)
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AA seq
274 aa
AA seq
DB search
MPELPEVETTRRGIAPHCENRTITQVTVRDGRLRWPVPGNLAELIEGSVIHTVDRRAKYL
LIGVSSATVAGTLIVHLGMSGSLRVITDQSEPLLHDHVELTLDNGIRLRFNDPRRFGCWL
WSETPDQHPLIASLGPEPLAPDFNGRLLYRLSRGKKTPVKSFIMDNHVVVGVGNIYANEA
LFKAGIHPRRAAGRISLDRYNRLVEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLL
VYGRNGESCRECGHPLKEIRMNQRSTVYCGKCQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaattgcccgaagtagaaaccacccgacgcggcatcgccccccattgtgaaaac
cggaccatcactcaggtaaccgtgcgcgacggacgcctgcgctggcccgtgccgggcaac
ctcgcggaactgatcgaaggctcggtaatccacaccgtggaccgccgggccaaatacctg
ctgattggcgtaagctcggccaccgttgccggaacattgatcgtgcacctgggcatgtcc
ggcagcctgcgggtgatcaccgatcagagcgagcccctacttcatgaccacgtggaactg
acgctcgacaacggcattcgcctgcgcttcaacgacccccgccgctttggttgctggctc
tggtccgaaacaccggaccagcatccactgatcgccagcctggggccggaacccctggca
ccggacttcaacgggcgcctgctctatcgactctcgcggggcaagaagacaccggtaaag
tccttcatcatggacaaccatgtggtggtgggcgtgggcaacatctatgcaaacgaagcc
ctgttcaaggccggcatccacccccgtcgcgccgccggccgcatcagcctggaccgttac
aaccgcctggtggaagccatccgcgaaaccctcagtgcggccattctcatgggtggaacc
accctgcgggactttgtgaacagcgacggcaaaccgggctattttgcccagtcgctgctg
gtgtatggccgcaatggcgagtcctgccgcgagtgcggccatccgctgaaggaaatccgg
atgaaccagcgctcgacggtttactgcggaaaatgccagcgctga
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