Marinobacter salarius: AU15_07050
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Entry
AU15_07050 CDS
T03593
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msr
Marinobacter salarius
Brite
KEGG Orthology (KO) [BR:
msr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msr03032
]
AU15_07050
03400 DNA repair and recombination proteins [BR:
msr03400
]
AU15_07050
Enzymes [BR:
msr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AU15_07050
DNA replication proteins [BR:
msr03032
]
Prokaryotic type
DNA Topoisomerases
AU15_07050
DNA repair and recombination proteins [BR:
msr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AU15_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
DUF2399
Toprim_4
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AHI31178
UniProt:
W5YXZ0
LinkDB
All DBs
Position
1465316..1467952
Genome browser
AA seq
878 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDFIVKSSVGHIRDLPVSGSGSTSDPKERARQAALTRK
MSPEEKVVHKKRKSREQLVARMGVDPDQDWSARYEILPGKEKVVSELKRLAKSADHIYLA
TDLDREGEAIAWHLQQTIGGEPEKYRRVVFNEITKRAIQEAFKDPGNLDNNRVNAQQARR
FLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRKFIPEEFWQLHADLASK
QAEQPVRFEVTRYDDKAYRPVSEKQSTDHVERLKDGTFKVAKREDKPTRSRPSAPFITST
LQQAASNRMGFSVKKTMMLAQRLYEAGFITYMRTDSTNLSQDAVSGCREFVKKQFGDKFL
PEKPRVYGSKEGAQEAHEAIRPTDVSRRPADISGLEKDAEKLYDLIWRQFIACQMADAEF
LSTSIVVANGDYELRTRGRIIKFEGFLKVAPQSAKKDEDIALPDIKVDETLTLKKLDPSQ
HFTKPSPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVRLQNRRFYAEKMGEIVTE
RLSESFPNLMDFDFTAKMEGELDDIAGGEVDWKKVLNDFYGRFRQQLETAESGEDGSMRA
NTPTETDIPCPTCSRPMQIRVASTGVFLGCSGYSLPPKERCKTTINLVSGDEVVSADEDV
DGEGETRLLRKKRRCPKCGTAMDSYLVDEGRKLHVCGNNPDCSGYEVEKGTFRIKGYEGP
TLECDKCGSEMQLKTGRFGKYFGCTNTECKNTRKLLKSGEPAPPKMDPVPMPELQCQKVE
DTYVLRDGASGLFLAASKFPKNRETRPPLVMEIKPHRKDIDPKYGYLMDAPERDPEGNPT
VIRYSRKSKEQYVMSEKDGKATGWSAWFVNGKWQPKEK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagcctcgttattgtcgagtcgccagcgaaagcgaagaccatcaacaaatac
ctggggtccgacttcattgtgaagtccagcgtcgggcacattcgcgaccttccggtcagc
ggtagcggctcaacgtcagatccgaaagagcgcgccaggcaggccgcgttgacccgcaag
atgagcccggaagagaaggtggttcacaagaagcggaaatccagggagcaactggttgcc
cgcatgggggtagaccctgaccaggactggagcgcccgatacgagatattgcccggcaag
gaaaaggttgtcagcgaactcaagcggttggcaaagtccgccgatcatatctatctcgca
acggatttggaccgtgaaggggaggcgatcgcctggcacctccagcaaaccattggtggt
gagccggaaaagtatcgccgcgtcgtgttcaatgagatcaccaagcgagctatccaggag
gccttcaaggatccggggaatctcgataacaaccgcgtgaacgcgcagcaggcgcgtcga
ttcctcgaccgggtcgtcggctatatggtatcgccattgctgtgggccaagattgcacgc
ggcctttcggcgggtcgggttcagtcggttgcagtccggcttatcgtcgaacgcgaacgg
gaaattcgcaagttcattcccgaagagttctggcagttgcatgctgacctggcttcgaag
caggccgagcagcccgttcgttttgaggtgacccgatacgacgataaagcctatcgtccg
gtcagtgaaaagcagagcaccgatcacgttgagcgcctgaaggatggtaccttcaaggtg
gccaaacgagaggacaagccgacacgctcacgtccctccgccccctttattacgtccacg
ctgcagcaggcggccagcaaccggatggggttcagcgtcaagaaaacgatgatgctggcc
cagcgcctctatgaggccggcttcattacctacatgcgtaccgactcgaccaacctgagc
caggatgccgtgagcggttgccgcgaatttgtcaaaaagcagttcggtgataaattcctg
ccggagaaaccaagggtatacggtagcaaagagggtgcccaggaggcccacgaggccatc
cgtccgaccgatgtgagtcgtaggccggccgatataagcggcctggagaaagatgctgag
aagctctacgacctgatctggcgccagtttattgcctgccagatggctgatgctgaattc
ctgagcacgtccattgtggttgccaacggtgattacgagcttcgtacgcgggggcggatc
atcaagtttgagggtttcctcaaagtggcgccccagtcggccaagaaagatgaagatatc
gcgcttccggatatcaaggttgacgaaaccctgacactgaagaagctcgatcccagccag
catttcaccaagccgtcgccgcgctataccgaggcgagcctggtcaaggagctggagaag
cagggtattgggcggccatccacctacgcatcgattatctccaccattcaggatcgcggc
tacgtccgtttgcagaatcgccgcttctacgctgaaaaaatgggcgagatcgtcaccgaa
cggttgtcggaatcctttccgaacctgatggactttgactttaccgccaaaatggaaggt
gagctggatgacatcgccggtggcgaggtggactggaaaaaggtgctcaatgacttctac
ggtcgtttccgtcagcaactggaaaccgccgagagtggcgaagacggaagcatgcgggcg
aataccccgaccgagaccgacattccgtgcccgacttgcagtcgccccatgcagatccgc
gtggccagtaccggcgttttcctgggatgctcagggtactcactgccgcctaaagaacgg
tgcaaaacgaccatcaacctggtgtccggtgacgaggttgtcagtgcggacgaagatgtc
gatggcgaaggtgaaacccgtctgctccgcaagaagcggcgttgtccgaaatgcggaact
gccatggacagttacctggtggacgaaggtcgcaaactccatgtgtgcggtaacaacccg
gattgttccggctatgaagtggagaagggtacgttccgaatcaagggttatgaaggtcca
accctggagtgcgacaagtgcggctccgaaatgcagcttaaaaccgggcgttttggtaaa
tacttcggctgtaccaacaccgaatgcaagaacacgcgtaagctgctgaaaagcggcgag
cctgcgcctcccaagatggatccggtgccgatgcctgagctgcagtgccagaaggttgaa
gacacctatgtgctgcgtgatggcgcttccggattgttcctggctgccagcaagttcccc
aagaatcgggagacgcgtccgccgctggttatggagatcaaacctcatcgcaaggacatt
gatcccaagtacggttacttgatggatgccccggagcgtgacccggaaggtaacccgacg
gtcatccgttacagccggaaaagcaaggagcagtatgtgatgtcggaaaaggacggcaaa
gcgacaggctggtctgcgtggtttgtgaacggcaaatggcagccgaaagagaaatga
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