Marinobacter salarius: AU15_09585
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Entry
AU15_09585 CDS
T03593
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
msr
Marinobacter salarius
Pathway
msr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AU15_09585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msr03400
]
AU15_09585
Enzymes [BR:
msr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AU15_09585
DNA repair and recombination proteins [BR:
msr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AU15_09585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHI31482
UniProt:
W5YQI9
LinkDB
All DBs
Position
1986352..1990059
Genome browser
AA seq
1235 aa
AA seq
DB search
MTEEIRKLDPLTLSLRGSQLIEASAGTGKTFTLALLYVRLVLGHRTVEEPLGEGIMPPNL
LVVTFTEAATKELRDRIRARLTEAAALFAVEPDTVDTTVMSKDPLVNLRNACPAADWAAC
RRKLLLAAEWMDEAAVSTIHGWCNRMLSEHAFDSGSLFRQTLETSQTDLLDDVVRDYWRT
FIYPMPPELMGEVLDTWKTPESLRQSVRSLLPHVDALPVPERDPLAAAEEAKRLREVELQ
ALKAPWPAWCDELEELLAETTKRKPKPLHGTTKNSLQKAVEHLREWATTDAAEPHEFLSS
KRTKGFDTLEADAFAEKWTGEDEPPHHPAMDAITELKPALKTMPVAKADILNHAACWIAR
RLDSEKQRLASMGFDDLLTRLDAALGGPQGERLAGTIRRQFPVAMIDEFQDTDPVQYRIF
DRIYRVASNDQDTSLLMIGDPKQAIYGFRGADIYTYLDARRAVSSRTYTLGTNYRSAVAM
VDGVNRVFAQADQSLPEGAFLFRAGDDNPLPFSPVEAKGTSQQWLVNGQPRPPLTFWTLT
DERPIAKETGREAMAEACAAEIARLLNLGQSGEAGFGAEGTPFEPVRPEHIAVLVNKRDE
ANAVRRSLGARGVRSVYLSDRNSVLQSVQSVEMLQWLQACAEPGQLPLIRAALATPTMGL
AYQELDRLFSDENALDREINRFQGYRELWQQQGVLPMLRRLLMDYDVPAKLLSGPDGERG
LTDILHIAELLQQDSQQLDGEHALIHHYTEMLQDSDDEDEHRTMRLESDAGLVKVVTVHK
SKGLEYPLVFLPFATEFREEKPNQAFIKYHDDEGRLQISLEPDEDTLARADRERLGEDIR
KLYVALTRSRHATWVGASGIKGWRQSGLGHLIGRSASDEDTDLMPFLQSVAIGEPAIDVA
PMPEPGDDVYAGDEEPELGNALEPVREARENWWIASYSAITYGARGGYGNDFAPASEDAE
QENLRDEDEPVVADTLAAMIPDWQGPQPVNQHAFPKGSGPGTFLHDILEWCAGEGFHKVA
DAPEDLHELLERRCQLRNWSDWTDTLKTWIYTLITMDIPLPGSSRTCSLAGLETFRPELE
FWFESHEVNTLAMDRLVRRHTLGGDPRPEAQQATFNGMLKGFIDLVFEHEGRYYVLDYKS
NFLGEDDQAYIPDVMKDKILEKRYDLQYVIYLLALHRLLKARLPDYDYDSHMGGAVYLFL
RGCDAPGAGAFTERPDRALIEELDRLFSGQGEKAA
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagagatccgcaagctcgatcccctaacactgtcgttgcgtggcagccagctg
atcgaggccagtgccggcaccggcaagacctttaccctggcgctgctgtacgtgcgcctg
gtactgggccatcgcaccgtggaagaacccctcggtgagggcatcatgccgcccaacctg
ttggtggtgacctttaccgaggccgccaccaaggaactccgggaccggattcgcgcccgc
ctgaccgaagccgcggcgttattcgcggttgaaccggacaccgtcgacaccacggtgatg
tcaaaagacccgctggtgaatctgcgcaacgcctgcccagcggccgactgggcagcctgc
cgccgcaagctgctgttggccgcggaatggatggacgaggctgccgtgtccaccatccac
ggctggtgcaatcgcatgctcagcgagcatgccttcgacagcggcagcctgttccgtcag
accctggagaccagtcagacggacctgctggatgacgttgtgagggattactggcgcacc
tttatctaccccatgccacccgagttgatgggggaggtgctggacacctggaaaaccccg
gaaagcctgcgccagtcagtgcgcagcctgttgccacacgttgatgccctgccagtgccg
gaacgtgacccactggctgctgcggaggaagcgaaacgcctgcgggaggtggaactgcag
gctctgaaagccccctggccggcctggtgcgacgaactggaagagctgttggcggaaacc
acgaagcgaaagccgaaaccgctgcatggcaccaccaaaaactcccttcaaaaagccgtg
gaacaccttcgggaatgggccacaaccgatgcggctgaaccgcatgagttcctgtcgagc
aagcgcaccaagggtttcgataccctggaggcggacgcatttgccgaaaaatggaccggc
gaggatgagcctccgcatcatcctgccatggacgccatcaccgaactcaaaccggcattg
aaaaccatgccggtggcgaaagcggacattctcaaccatgccgcctgctggatcgcccgt
cgcctggacagcgaaaaacagcgcctggccagtatgggctttgacgacctgctcacacga
ctggatgccgcgttgggcggcccccagggcgaacgcctggcaggcactattcgtcggcag
tttccggtggcgatgatcgatgaattccaggataccgacccggtgcagtaccggattttc
gaccgtatataccgggtggccagcaacgaccaggacaccagcctgttgatgattggtgac
cccaagcaggcgatttacggtttccgtggtgctgatatctacacctatctggatgcccgt
cgggcggtcagcagccgaacctacacgctggggaccaactaccgctcagctgtcgccatg
gtagacggcgtcaaccgggtattcgcccaggccgaccagtcccttcccgaaggggccttc
ctgtttcgagccggggacgacaacccgttgcccttcagccccgtggaggccaaaggtacc
agccagcaatggcttgttaacgggcagccgcgaccaccactgacgttctggaccctgacc
gatgagcgccctatcgccaaggaaaccggcagggaggccatggccgaggcctgtgcggcg
gagattgcccgcctgttgaatctggggcagagcggcgaggcgggctttggggccgagggc
acgccgtttgagcccgtgcgaccggagcacattgctgtgctggtcaacaaacgtgacgag
gcgaatgccgtccggcgatcattgggcgcccggggcgttcgcagtgtgtacctctcagac
cgtaattccgtgctgcagtcggtccagtcagtggagatgttgcagtggctgcaggcctgc
gccgaaccgggccagcttccgctgattcgcgcggcactcgccacgcccaccatgggcctg
gcttatcaggagctggaccgtctgttcagtgacgaaaatgcgctggaccgcgagatcaac
cgctttcagggctaccgtgaactctggcagcaacagggcgtactgccgatgctgcggcgc
ctgctgatggactatgacgtgccggcgaagctgctgtccgggcctgacggcgaacgcggc
ctgaccgacattctgcatattgccgaactgcttcagcaggacagccagcagctggacggc
gaacatgcgctcattcaccactacaccgagatgttgcaggattccgacgatgaggacgaa
caccgcaccatgcgcctggaaagtgatgccgggctggtcaaggtggttactgtccacaag
tccaaaggcctggagtacccgttggtgttcctgccgtttgccaccgaattccgcgaggaa
aagccgaaccaggcgtttatcaagtaccacgatgacgaaggccgactgcagatttccctt
gagccggatgaagacaccctggccagggccgaccgcgaacgactgggtgaggatattcgc
aaactctacgttgccctgacccgatcccgtcacgccacctgggttggcgccagcggcatc
aaaggctggcggcagagtggtctggggcacctgattggccgctctgccagcgatgaagac
acggacctgatgcccttcctgcagtccgtggccatcggcgagcccgcaatcgatgtggcg
cccatgcctgaaccaggagacgacgtttacgcgggcgacgaggagccggagcttggcaac
gccctggagccagtgcgggaagcccgggaaaactggtggatcgcaagctattccgcgatc
acctatggcgcccgcggtggctacgggaacgacttcgcaccggccagtgaggatgcggag
caggagaacctgcgtgacgaggacgagcccgttgtggccgataccctggccgcaatgatt
cccgactggcaagggccgcaaccggtcaaccagcatgctttcccgaaaggctccggcccc
ggcaccttcctgcatgatattctggagtggtgcgctggagaggggttccataaggtggct
gatgcgccggaggatctccacgagctgctggagcgacgctgccagttacgcaactggagt
gattggactgacaccctgaaaacctggatctacaccctgatcaccatggacatcccgctt
ccgggcagcagcaggacatgctccctggcgggccttgaaacctttcggccggaactggag
ttctggtttgaaagccatgaggtgaacaccctcgccatggacagactggtccgccggcat
acgctgggtggtgatccgcgtcccgaggctcagcaagccaccttcaatggcatgctgaaa
gggtttatcgacctggtgtttgaacacgaaggccgctactacgtgctggactacaagtcg
aacttcctgggggaggacgatcaggcctatatccctgacgtgatgaaagacaaaatcctt
gagaaacggtatgacctgcagtacgtcatctacctgctggcgttgcaccgcctgttgaaa
gcgcgcctgccggactacgattacgacagccacatgggaggtgccgtctacctgttcctg
cgtggctgcgatgcaccgggcgccggcgcttttaccgaacgaccggacagggccctgatt
gaggaactggaccggctgttcagcggccagggggagaaagcagcatga
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