Marinobacter salarius: AU15_15210
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Entry
AU15_15210 CDS
T03593
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msr
Marinobacter salarius
Brite
KEGG Orthology (KO) [BR:
msr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msr03016
]
AU15_15210
Enzymes [BR:
msr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AU15_15210
Transfer RNA biogenesis [BR:
msr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AU15_15210
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Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AHI32126
UniProt:
W5YSK3
LinkDB
All DBs
Position
complement(3148598..3149746)
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AA seq
382 aa
AA seq
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MDSNTPAASVPAAPDTVTWIREPDDLDRWLAEGQGEPLALDTEFERVNTFFPIPGLVQLG
MGQRFCLVDPSVAEASEGFRNALTDPDTPKLLYAMSEDLELFRHWLQLEPEGILDLQIGA
ALAGAGFSVGYARLVETLFGESLDKSATRSDWVSRPLSAAQERYALDDVRFLVPLYHWVI
TRLQKRGLEAALADESTRFSKELAAQDNPDSHYLKLRGGWTLSRQQQGVLKTLVCWREHE
SRLRDRPRNRVVADALLIAIAQRLPQSVRELSNIQGLPPAVVRRYGDTIINMVAEASTAD
NSGIDVIAAPLSRQDQMFYKQLKRLMVKAAEERDVPVELLAPRKRLEAVVQQRNLAAGLF
DEGWRRDLLAPVQEQIEELLKS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggattccaacaccccagccgcttccgttcctgcggctcccgacacggttacctggatt
cgggagccggacgacctggaccgctggcttgccgaagggcaaggcgaaccgcttgcactg
gataccgagttcgaacgggtcaacaccttcttcccgattcctggtctggtccagttgggg
atggggcagcggttctgcctggtagacccgtcggtcgcagaggcgtcagagggctttcgc
aacgcgctcaccgacccggacacccccaaattgctatacgccatgagtgaggatctggaa
ctgttccggcactggttgcagctggaaccggagggcattctcgacctgcagatcggcgcc
gcgctggccggtgccggcttttccgtcggttatgcccggctggtggaaactcttttcggt
gaatcactggataaatcggcgacgcgctcggattgggtttctcgcccgctttccgcagct
caggaacgctacgctctggacgacgttcgcttccttgttcccttgtatcactgggtgatt
actcggttgcagaaacggggccttgaagcggcattggctgacgaatccactcgattttca
aaggaactggcagcccaggataatcccgacagccattacctgaaactgcgaggcggctgg
acattgagccgccaacagcagggggtgctgaaaaccctggtgtgttggcgggaacatgag
tcgcgcctccgggatcggccccgcaaccgtgttgtggccgatgcgctgctgattgccatc
gcccagagactgccacagtcagtacgggagctatcgaatatccagggcttgcctccggcc
gtggtcaggcgctacggggatacaattattaatatggttgcggaggcatcgaccgcggat
aattccggcatcgacgttattgccgctccgctgagccgccaggaccagatgttctataaa
cagctcaaacgcctgatggtgaaggcggcggaggaacgggatgtgccggtggaactgctg
gcgcctcgcaagcgtcttgaggctgttgtacaacaacgaaacctggctgccgggctgttt
gacgagggctggcgccgtgacctcctggcaccggtgcaggaacagattgaggaactactg
aaatcatga
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