Marinobacter salarius: AU15_19185
Help
Entry
AU15_19185 CDS
T03593
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
msr
Marinobacter salarius
Pathway
msr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AU15_19185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msr03021
]
AU15_19185
03400 DNA repair and recombination proteins [BR:
msr03400
]
AU15_19185
Enzymes [BR:
msr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AU15_19185
Transcription machinery [BR:
msr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AU15_19185
DNA repair and recombination proteins [BR:
msr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AU15_19185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
DUF22
Motif
Other DBs
NCBI-ProteinID:
AHI32581
UniProt:
W5YTW2
LinkDB
All DBs
Position
3979188..3980192
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVHELLTPRTIDVKESSAMRAKVTLEPLERGFGHTLGSALRRILLSSMPGCAITEAQ
IDGVLHEYSAIEGVQEDVIEILLNLKGVAVKMGGRDDAEVTLSKKGPGVVTAGDIKLDHD
VEITNPEHVICHLSANGEVNMRLKVARGRGYEPADQRGLDEDETRAIGRLQLDATFSPVR
RVAYAVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDHEKEPE
RVEEEEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLRGDDRVLGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtacatgagttattgacacctcgtaccattgacgtgaaagaatcaagc
gccatgcgcgccaaagtgaccctggagcctctggaaaggggcttcggtcatactcttggt
agcgcactgcgtcggatactcttgtcctcaatgccgggctgtgccattaccgaggcacag
atcgacggcgtgttgcacgagtacagcgcgatcgaaggtgttcaggaagacgtcattgag
attcttctgaatcttaaaggcgtggccgtgaaaatgggcggccgggacgatgccgaggta
accctcagcaagaaaggcccgggcgttgtcactgccggtgatatcaagctggatcacgat
gtcgagatcaccaacccggaacatgtgatctgtcacctgagtgccaatggtgaagtgaac
atgcgtctgaaggttgcccgtggtcgcggctatgagcctgctgatcagcggggtctggac
gaggacgaaactcgcgccattggacgcctgcaactggacgcaactttcagtccggtccgc
cgtgttgcctacgccgtggaaagtgcacgggtagaacagcgcaccgacctggacaagcta
gttattgatttggaaaccaatggtacgatcgacccggaagaagcgattcgccgggccgcg
accatcctccagcaacaactggccgtgtttgttgatttcgatcacgagaaagaacccgag
cgtgttgaggaagaggaagaaattgatccgattctcctgcgtccggttgatgatctggaa
ttgacagtgcgttcagctaactgcttgaaagctgagaatatttactacatcggcgatctg
attcagcgcactgaagttgagctgctgaagacgcctaaccttggtaaaaagtcgcttact
gagatcaaggacgtgctcgcgtcccgcggtctgtcactgggtatgcgtcttgataactgg
ccgccggctagccttcgtggcgacgatcgggtcctgggcggttaa
DBGET
integrated database retrieval system
