Entry |
|
Symbol |
pcrA
|
Name |
(GenBank) DNA helicase II
|
KO |
|
Organism |
mss Mycoplasma suis Illinois
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mss00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSU_0302 (pcrA)
03430 Mismatch repair
MSU_0302 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mss03400]
MSU_0302 (pcrA)
Enzymes [BR:mss01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSU_0302 (pcrA)
DNA repair and recombination proteins [BR:mss03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSU_0302 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
MSU_0302 (pcrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(241285..243519)
|
AA seq |
744 aa
MNLEELRENNRKKLQEPNRQQLEIINFNENRNVGIIAGPGSGKTFVIIEKIRFYLSNKIE
PRKILLVTYTNRGIIEIKQRINKFVKAKREFEYAGTLHSICKKFLEREFKFELSELLNWK
FNKLIIQSMEDKYFFLREEIPKQINEIFLGQGEEESDQSVKISRDIAAEIFEIVLEETEN
ALSRNKIENYLNSGFKLKTEEYQWFSPRLLMKIKRFSFPIEKIQKVLKNVFNNYQKKLDE
KKLFDFDDLIIYFHYLVSRNPIKKEIISSKFEKILVDEFQDMNFLQLLIIAEISNNKKNI
LFVGDPNQAIYGFQGAYPEIFNYFKTNIDLTTIFFNLSQNYRSTKNILDFSHKLITKNDQ
KGIFNQMFTENESGKKVNLLVNSKRGGLMNRVYSIIKNLEADGVDLNQIAIISRTHMETK
YLRRWFMKKGLKFLDFNFSKYIFWNYESYFLICLISLRFSGSSFAIKFILEFYFKKWEIP
EYFLQQIEDYSPDVEKALNDLTSSNFENKWTSPEDKGSIAKIRKLWRLIKEELRKNKQQG
RNEEVDYVNNHFEKIINSQDELKEWIKEHINSPLQKEIQQKKWVCIDNISQFYKVMSFYS
NSNVFKLQEIVETLLVYVKHFVSHVTESSYLNFSTVHGAKGCEFDYVFILNLIENKFPKH
YAQTQQDLEEERRVLFVGMTRAKKELWLVSDLPTKNLALKGKDLKSFPKVSKFLTELECF
RPDNRDIKILTNLTNDIPLEAFYL |
NT seq |
2235 nt +upstreamnt +downstreamnt
ttgaatctagaagaactaagagaaaacaaccgaaaaaaattacaggaacccaacaggcaa
caattagaaataattaactttaatgagaatagaaatgtaggtattattgccggaccaggg
tccggtaaaacttttgtaataatagaaaaaattaggttctatctttctaacaaaatagag
ccccgaaaaattttactagtaacctacacgaatagaggaatcatagaaattaagcagaga
attaataagtttgtaaaagctaagcgagagttcgagtatgctggaactcttcactctatt
tgtaagaaatttctagaaagagagttcaaatttgaactttcagaacttcttaactgaaag
ttcaataaattaattattcagagcatggaagacaaatattttttcctgagggaagaaata
ccaaaacaaatcaatgaaatctttctggggcaaggagaagaagaaagtgaccaatcagtc
aaaatttcaagagatattgctgcagaaatcttcgaaattgttcttgaagagacagaaaat
gctctctcaagaaataagattgaaaactatttaaatagcggtttcaagctaaaaactgaa
gagtatcagtgattctctccaagacttcttatgaaaatcaagcgattttcatttcctata
gaaaaaattcaaaaggtattgaaaaatgttttcaataactatcaaaagaagttagatgaa
aagaaattatttgacttcgacgatctaataatttattttcactacttagtaagtaggaat
ccaattaagaaggaaattatttcctcaaagtttgaaaagatactagttgatgaatttcaa
gacatgaactttcttcaacttcttatcattgcagaaatatccaataataagaaaaatata
ttatttgttggagatcctaatcaagcgatatatggtttccaaggagcatatcctgaaatc
tttaattactttaagacaaatatagacttaacaactatattctttaacttatctcaaaat
tacagatctacaaaaaatattttggacttttctcacaaattaataactaagaatgatcaa
aaagggatatttaatcaaatgtttactgaaaatgaaagtggtaaaaaagttaacttacta
gttaacagtaagagaggaggtttaatgaatcgagtttactcgattattaaaaatctagaa
gctgatggagttgacttaaatcaaattgcaatcatttcaagaactcatatggaaactaaa
tatttgcgacgatgatttatgaaaaaaggattaaagttcctagactttaacttttctaaa
tatattttttgaaattatgaaagttatttcttaatttgcctaatatctcttagattctct
ggaagttctttcgcaatcaaattcattttggaattctatttcaaaaagtgggaaatacca
gagtatttcctacagcaaatagaagattattctcctgatgtagaaaaagctctaaatgat
ctaacaagttctaattttgaaaataagtgaacttccccagaagacaagggaagtatcgcc
aaaattagaaaactttggagattaattaaagaagagttaagaaaaaataaacaacaggga
agaaatgaagaagttgactatgtaaataatcattttgaaaagattattaatagtcaagat
gaattaaaagagtgaataaaagaacacattaatagtcctcttcaaaaagagatacagcaa
aagaagtgagtatgtatagacaatatctcccaattctataaagttatgtccttctatagt
aactcaaatgtatttaagttacaggaaatagttgaaactctattagtttatgtgaagcac
tttgtgagtcacgtaacagaaagtagttatcttaacttttccaccgttcacggtgcaaaa
ggttgtgagttcgattatgtattcatacttaatctaattgagaataaattcccaaaacat
tatgctcaaactcagcaagacttagaggaagaaagaagagttctttttgtaggtatgaca
agagctaaaaaagaactctgattagttagtgatttgccaactaagaatttagctctcaag
ggaaaagatcttaagagtttccctaaagtatctaaattcttaacagaattagagtgtttt
aggccagataatagagatataaaaatactaactaatttgacaaatgatattcctctagaa
gctttttatttgtaa |