Methanosphaera stadtmanae: Msp_0388
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Entry
Msp_0388 CDS
T00313
Symbol
truA
Name
(GenBank) TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mst
Methanosphaera stadtmanae
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mst03016
]
Msp_0388 (truA)
Enzymes [BR:
mst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Msp_0388 (truA)
Transfer RNA biogenesis [BR:
mst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Msp_0388 (truA)
Prokaryotic type
Msp_0388 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABC56789
UniProt:
Q2NHB4
LinkDB
All DBs
Position
complement(451684..452508)
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AA seq
274 aa
AA seq
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MRRVALKIAYIGSNFHGYQRQPNYRTVEGELLRVFKETNIIEDTWTAHYSVAGRTDKGVH
STGNVISFITDEDIHINQLNGLLPDDIKIIGEARVPYGFKVRFPLTRTYTYIQPISPFEK
KNLDITKMHVAMESFIGKHNFRNFSKRNEKNPNRKIIDVNLEVDEDVLIFTIVGESFLWN
MVRKMVTSIMEVGYGKLDINDINELLKPKELRQFIRLQPAPANGLILSDMEYKNIKFKDS
EYAKNKLVEFLKKEYMLHEQEKKADCRLIKILKK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagttgcattaaaaatagcttatattggttctaattttcatggataccaaaga
caaccaaattatagaacagttgaaggtgaattacttagagtttttaaggaaacaaatatt
attgaagatacatggactgcccattattctgtagctggtagaacagataagggagttcat
tctactggaaatgttatttcatttattacagatgaagatattcatataaatcaattaaat
ggcctattacctgatgatataaagattattggagaagctcgtgttccatatggttttaag
gttagatttcccctaactagaacatacacatatattcaacccattagtccctttgaaaag
aagaatttagatattactaagatgcatgttgcaatggaatcttttattggaaaacataat
tttagaaatttttctaaaagaaatgaaaaaaatcccaatagaaaaataattgatgttaat
ctagaagtagacgaagatgttcttatatttactattgtaggtgagagttttctttggaat
atggttcgtaaaatggttacatccattatggaagttggttatggtaaactagatattaat
gatattaatgaattattaaaacctaaagaattaagacaatttattagattacaaccagca
cctgctaatggattaatattaagtgacatggagtataaaaatattaaatttaaggattcg
gaatatgcaaaaaacaaacttgttgaatttttaaaaaaggaatatatgttacatgaacag
gaaaaaaaggctgattgtaggttaattaaaatattgaaaaaataa
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