Methanosphaera stadtmanae: Msp_0873
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Entry
Msp_0873 CDS
T00313
Symbol
truB
Name
(GenBank) TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mst
Methanosphaera stadtmanae
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mst03016
]
Msp_0873 (truB)
Enzymes [BR:
mst01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Msp_0873 (truB)
Transfer RNA biogenesis [BR:
mst03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Msp_0873 (truB)
Prokaryotic type
Msp_0873 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
UPF0113
DUF6930
Motif
Other DBs
NCBI-ProteinID:
ABC57261
UniProt:
Q2NFZ2
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All DBs
Position
complement(1003214..1004179)
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AA seq
321 aa
AA seq
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MTEYEYKCDVEVNYDYGCHPRNRTIEEHINKGIINIDKPSGPTSHEVDVWLKDIMHVDKT
GHGGTLDPKVTGVLPVALNTATKSLSLLLLSPKEYVCLMRLHKPVDEEDIISILDEFTGK
IYQIPPVKSAVKRELRVRTIYEVKLLEIRDNQDVLFRITCQSGTYIRKYCHDIGEALGCG
AHMAELRRTMAGSFLEDDTLTTLQDVTDAYYFYKEDGDETLLRKLIQPMEHTTKYVKKIY
VKDTAVDSICHGANLASSGVVKLDNQIHENNTVAVMTLKEELLAIGTCMYSTNDIINSDT
KIIVDIQKVFILPNTYPKMWK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatatgaatataaatgtgatgtggaagttaactatgattatggatgtcatcca
agaaatagaacaatagaggaacatattaataagggaattattaacattgataaaccttca
ggtcctacctcacatgaggttgatgtatggttaaaagatattatgcatgttgataaaact
ggtcatggtgggacactcgatcctaaggtaacaggtgttttacctgtagcattaaatact
gcaactaaatcattatcacttctattattatcaccaaaggaatatgtatgtcttatgaga
ttacataaacctgtggatgaagaggatattatatctattcttgatgaatttactggtaag
atatatcaaatacctccagttaaatcagcagtgaaaagagagttacgtgtacgtacaatt
tatgaagtaaaacttttagaaattagggataatcaagatgtactatttagaataacatgt
cagtctggtacatatattcgtaagtactgtcatgatattggagaagcactaggttgtgga
gcacacatggcagaattaagaagaactatggctggaagttttctagaagatgatactcta
acaacattacaagatgttacagatgcatactatttctataaggaagatggtgatgaaaca
cttcttcgaaagttaattcagccaatggaacatacaacaaagtatgttaaaaagatatat
gttaaagatacagcagtagattctatatgtcatggtgcaaatcttgcaagtagtggtgtt
gtaaaacttgataatcaaattcatgaaaacaatacagtagcagtaatgacacttaaagaa
gagttacttgctattggtacttgtatgtattctacaaatgatattataaattctgatact
aaaattatagtggatatccaaaaagtatttatactaccaaacacatatcctaagatgtgg
aagtaa
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