Methanosphaera stadtmanae: Msp_0945
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Entry
Msp_0945 CDS
T00313
Name
(GenBank) predicted RecB family exonuclease
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
mst
Methanosphaera stadtmanae
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
mst02048
]
Msp_0945
Enzymes [BR:
mst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
Msp_0945
Prokaryotic defense system [BR:
mst02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
Msp_0945
Subtype I-B factors
Msp_0945
Subtype I-C factors
Msp_0945
Subtype I-D factors
Msp_0945
Type II CRISPR-Cas system
Subtype II-B factors
Msp_0945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
Erp_C
NucS_C
CutA1
Motif
Other DBs
NCBI-ProteinID:
ABC57333
UniProt:
Q2NFS0
LinkDB
All DBs
Position
1089388..1089909
Genome browser
AA seq
173 aa
AA seq
DB search
MDELNTDNINGTKINYYFICPTKLWLFSHNIHMENNSEDVKLGKHLHETTYKRENEFLID
NKINIDFIKINHENNTTEIHEIKKSKKMKKAHKYQLLYYMNYLKKEKNIENIKGYLNYPN
TREKEEVILTKTNEEELEKIIKKIQDIIKQEKPPIVQKKNICLKCAYYELCFI
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggatgaattaaatactgataatattaatggtaccaaaataaattactatttcatatgc
cctacaaaactttggttattctcacataacatacatatggaaaataactctgaagatgtt
aaacttggaaaacatctgcacgaaacaacatataaacgagaaaatgaatttttaattgat
aataaaataaatattgactttatcaaaataaatcatgaaaataatactacggaaatacat
gaaattaaaaaaagtaaaaaaatgaaaaaagcacataaatatcaactattatactatatg
aactacttaaaaaaagagaaaaatattgaaaatataaaaggatacttaaattatccaaat
actcgtgaaaaagaagaagtcatactaacaaaaacaaatgaagaagaacttgagaagata
attaaaaaaatacaagacataattaaacaagaaaaaccacctattgttcaaaagaaaaat
atatgtttaaaatgtgcatattatgaactttgtttcatataa
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