Methanosphaera stadtmanae: Msp_1095
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Entry
Msp_1095 CDS
T00313
Symbol
rad50
Name
(GenBank) DNA double-strand break repair protein Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mst
Methanosphaera stadtmanae
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mst03400
]
Msp_1095 (rad50)
DNA repair and recombination proteins [BR:
mst03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Msp_1095 (rad50)
Archaeal homologous recombinant proteins
Msp_1095 (rad50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
SbcC_Walker_B
AAA_29
AAA_27
ABC_tran
Rad50_zn_hook
UCP019236
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABC57478
UniProt:
Q2NFC5
LinkDB
All DBs
Position
1240299..1243007
Genome browser
AA seq
902 aa
AA seq
DB search
MIINNIELTNFKSHKSTKIEFKKGISLILGENGAGKSSILEAISYAFFKQVNGKLEENIR
KPQNRKDIVDKMEVCVQFQHNGRLYKIARGRNKSKSVAKLELLDKNGIHLLSKGDRNVTN
DIESILEMDSKSFLNAIYIRQGEITNLIEKTAAERKELITKLLNIDSLEVAWDEIKNIIN
IYETQKNVNEGKLANINEIREKNTELLQNISEKERQIKEYETEINTKKSQLTIIEEDIKK
EDIIKNKHEKLTNDYQFKKEESNHLEDLENKYTYELNEINKNKEKIRILEKEISPLNKLR
EIKDLKTKINSYKKDSLNKENIIREINENKGIIIDNKENYEKYIQLKKEKEDISKELEKL
TEKKLKEMEVESEIKHLTDQVNILYYKINQISEKARKLFKKNINNPIDIQKITIREKTKT
GELIKILEKKILKKKKEISVCETELNSTKKSLEDLEKTEDICPICQSEISHDKHAELSDK
YKNTIVTYELRIEELSKANNNQEIELQELKEYEQNINDINIQKLKEEHAEYTQLCDTIHE
KKKLKPIIEETKAKIEEIKNKENDCNQSIESLEEDYNKYNFAKIRLNQLPQVDEANKEKE
IIDNKISENTLKIKKISQTVRIGDDIERKIKYLEKKQNDYNQLIGTVLNEEKIIQEKEET
TTKIHKVKLELSNIKSQINELSFDYEKYEKINNKYTLCQENIESISRNYIVKKTELKKDK
QQQEKYVEEIKNLKEIEKQQVHIGDYIQLLNEIRSTYSKDGVQKDLRNIVRPEIEKNTMD
IFSEFGFDYSAINLDEDYNLIVQTRQEQIDLNMLSGGEKIVIALALRLGIAKAISKNKME
LLVLDEPTIHLDSERRTELIDIIRKINVVPQMIVVSHDEEMEALSTNIIKISKNNGISTC
NS
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgataataaataacatagaattaacaaattttaagtcacataaatccacaaaaatagaa
tttaagaagggaatttcattaatactcggagaaaatggtgctggaaaatcaagtattctt
gaagcaataagttatgcttttttcaaacaagtaaatggtaaacttgaagaaaatattcgt
aaacctcaaaatagaaaagatattgtagataaaatggaggtgtgtgttcaatttcaacat
aatggtcgtctatataagatagctcgtggaagaaacaagagtaagagtgttgctaaatta
gaattattagataaaaatggaatacatctcctaagtaaaggagatagaaatgttacaaat
gatattgaaagtattctagaaatggattcaaaatcattcttaaatgcaatctatataaga
caaggggaaataacaaacttaattgaaaaaactgctgcagagagaaaggaacttattaca
aaactattgaatattgattcattagaagtagcatgggatgaaataaaaaatattataaat
atttatgaaacacaaaaaaatgttaatgaaggaaaacttgctaatatcaatgaaataaga
gaaaaaaatactgaattacttcaaaatattagtgaaaaagaaagacaaatcaaagaatat
gaaactgaaattaacacaaaaaaatcccagttaaccattattgaggaagatattaaaaaa
gaggatattatcaagaacaaacatgaaaaattaactaatgattatcaatttaagaaagaa
gaatcaaatcatttggaagaccttgaaaataaatacacatatgaacttaatgaaattaac
aaaaacaaagaaaaaataagaatattagaaaaagaaattagtccacttaataaattaaga
gaaataaaagatcttaaaacaaaaataaattcttataagaaagattcattgaataaagaa
aatattattcgtgaaataaatgaaaataaaggaattattatagataataaagaaaattat
gagaaatatattcagttaaagaaagaaaaagaggatatttccaaagaattagagaaatta
acagaaaaaaaattgaaagaaatggaagttgaaagtgaaataaaacacttaacagaccaa
gttaatatattatattataaaatcaatcaaatttcagagaaagcccgtaaactatttaaa
aagaatattaataatcctatagatattcaaaaaattactattagagaaaaaacaaaaact
ggagaattaataaaaatattagaaaagaagattcttaagaaaaaaaaagaaatcagtgtc
tgtgaaactgaacttaatagtactaaaaaatccctcgaagatcttgaaaaaactgaggat
atttgtccaatttgtcaatcagaaattagtcatgataaacatgcagaactttctgataaa
tataaaaatactattgtgacttatgaattaagaatagaagaacttagcaaagcaaataac
aatcaggaaatagaacttcaagaattaaaggaatatgaacaaaatataaatgatattaat
attcaaaaattaaaagaagaacatgctgaatatacacaactttgtgataccatacatgag
aaaaagaaattaaaacctattattgaagaaacaaaagctaagatagaagaaattaaaaat
aaagaaaatgattgtaatcagtcaattgaatctcttgaagaagattataataaatataac
tttgcaaaaattagattaaatcaactgccacaagtagatgaagctaataaagaaaaagag
attattgataataaaatcagtgaaaataccctgaaaattaagaaaatttcacaaacagta
cgtattggtgatgatattgaaagaaaaataaaatatcttgaaaaaaaacagaatgactat
aatcaattaattggtactgttttaaatgaagagaaaataattcaggaaaaagaagaaact
acaactaaaatacataaagttaaattggaactttcaaatattaaaagtcaaattaatgaa
ttatcatttgactatgaaaaatatgaaaaaataaataataaatacacactatgtcaagaa
aatattgaaagtattagtagaaattatattgtcaaaaaaacagaacttaaaaaagacaaa
caacaacaagaaaaatatgttgaagaaataaaaaatcttaaagaaatagaaaaacaacaa
gttcatattggagattatattcaactactaaatgagattagaagtacatatagtaaagat
ggagttcaaaaagatctaagaaatatagtacgtccagaaattgaaaaaaataccatggat
atatttagtgaatttggatttgattattcagctataaatctagatgaagactataattta
atagtacaaacaagacaagaacaaatagatttaaatatgcttagtggtggagaaaaaata
gttattgcactggcattaagacttggaattgcaaaggccatatctaaaaataagatggaa
ttactagttttagatgaacctacaattcatctggatagtgaacgtagaacagaattaatt
gatattattcgtaaaattaatgttgttcctcaaatgattgttgttagtcatgatgaagaa
atggaagcattatctacaaatattataaaaatctcaaaaaataatggaatatcaacatgt
aacagttaa
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