Methanosphaera stadtmanae: Msp_1165
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Entry
Msp_1165 CDS
T00313
Name
(GenBank) predicted hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mst
Methanosphaera stadtmanae
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mst03019
]
Msp_1165
Messenger RNA biogenesis [BR:
mst03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Msp_1165
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
PPP5
Motif
Other DBs
NCBI-ProteinID:
ABC57546
UniProt:
Q2NF57
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All DBs
Position
1335356..1336246
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AA seq
296 aa
AA seq
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MTKKEEDYIKEFAQDREIISPFLIKQKEMKKTKTNTSYLEVTLQDKTGQIKGRMFKHRPF
KTYAKIEKNTVWNIVGKIQEFPTESGRFNILIESMNPTTNYNEEDFIRKVEDYDKHVEFL
FNTIETIENIHLKKLLKEFFNDEEFKNNFLTAPAAKIHHHNYKGGLLVHTNEVIKICQTI
TYIYNKINYDLLITGAILHDIGKIETYDYETENIEMKYEGIMLDHLFIGANMIENRIKKI
DAPKKLKIQLIHMILSHHGDTSLGWGSAVSPKTPEALALHHADDMSAKITSSLENK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaaaaagaagaagattatataaaggaattcgcccaagatcgagaaattatcagc
ccttttctcataaaacaaaaagaaatgaaaaaaacaaaaacaaacacatcatatcttgaa
gtaacactacaagacaaaacaggacaaataaaaggtagaatgtttaaacacagaccattt
aaaacgtatgcaaagatagaaaaaaatactgtgtggaatattgttggaaaaatacaagaa
tttccaactgagagtggaagatttaatatattaattgaaagtatgaacccaacaacaaac
tacaatgaagaagattttataagaaaagtagaagactatgataaacatgtagaatttcta
tttaacaccatagaaacaattgaaaatatccacctaaaaaaattattaaaagaatttttt
aatgatgaagaatttaaaaataattttttaacagcacctgctgcaaaaatacatcatcat
aattataaaggaggactacttgttcatacaaatgaagtaataaaaatatgtcaaacaata
acatacatctacaacaaaatcaactatgatttactaataactggagcaatacttcatgat
ataggaaaaattgaaacatatgactatgaaactgaaaacattgaaatgaaatatgaagga
atcatgttagatcatctatttattggagcaaatatgatagaaaatagaattaaaaaaatt
gatgcacccaaaaaacttaaaatacaactaatacatatgatacttagtcatcatggagac
acatcccttggatggggttctgcagtgagtccaaaaactcctgaagcattagcactacat
catgcagatgatatgagtgcaaaaattaccagttcattagaaaataaataa
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