Methanosphaera stadtmanae: Msp_1252
Help
Entry
Msp_1252 CDS
T00313
Name
(GenBank) putative exosome complex, exonuclease 2 subunit
KO
K12589
exosome complex component RRP42
Organism
mst
Methanosphaera stadtmanae
Pathway
mst03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Msp_1252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mst03019
]
Msp_1252
Messenger RNA biogenesis [BR:
mst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Msp_1252
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Msp_1252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ABC57629
UniProt:
Q2NEX4
LinkDB
All DBs
Position
1419509..1420306
Genome browser
AA seq
265 aa
AA seq
DB search
MVNVISEVSKEKVFDLLNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMVSIGCTTVIVG
VKAQMTTPFNNAPNSGIIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDL
DKLCVIEGSKSWKLHIDMYIVDFDGNIMDAACLGAICALLTTKIPTATSVNGEIVIDEEN
LTPLPIKNRSILCTVVKINNQLIVDPSKIEEILMDSSVSFGFREDGSLCALQKCGLNTLT
HKEVTKAMKIASIRAKELFSIIDTI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgtaatctctgaagtttctaaagaaaaagtatttgatttattaaatcaggga
aaaagaattgatgatagaaaatttagtgaatatagaaatatttccataaaaaccaattat
attggaaaggctgatggttctgcaatggtgtctattggttgtactactgtgattgttgga
gttaaagctcaaatgacaacaccatttaataatgctccaaatagtggtattatcataaca
aatactgagttacttgccattgcaagtcgtaattttgaatatggccctccaaataaattt
gctgttgaaatatcacgcgttgtagatagagctattcgtgaatctcctgttgttgattta
gataaattatgtgttattgaaggaagtaaatcatggaagttacatattgatatgtatatt
gttgactttgatggaaatattatggatgcggcatgccttggagctatttgtgcactttta
acaacaaaaattcctacagcaaccagtgtaaatggtgagattgttattgatgaagaaaat
ttaactccccttcctattaaaaatagaagtattttatgtacagttgtgaaaatcaacaac
cagttaattgttgatccttcaaaaattgaggaaatattaatggattcaagtgtatcattt
ggatttagagaggatggtagtttatgtgcccttcaaaaatgtggtcttaatacattaaca
cataaggaagttacaaaagctatgaagattgcaagtattcgtgcaaaagaattattttct
ataattgatactatataa
DBGET
integrated database retrieval system
