Methanosphaera stadtmanae: Msp_1363
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Entry
Msp_1363 CDS
T00313
Symbol
prf1
Name
(GenBank) peptide chain release factor, subunit 1 (aRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
mst
Methanosphaera stadtmanae
Pathway
mst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Msp_1363 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mst03019
]
Msp_1363 (prf1)
03012 Translation factors [BR:
mst03012
]
Msp_1363 (prf1)
Messenger RNA biogenesis [BR:
mst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Msp_1363 (prf1)
Translation factors [BR:
mst03012
]
Eukaryotic type
Release factors
Msp_1363 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Zn_ribbon_8
Relaxase_C
YfdX
RbpA
DUF5817
Ogr_Delta
zf_C2H2_10
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ABC57740
UniProt:
Q2NEL3
LinkDB
All DBs
Position
1532530..1533765
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AA seq
411 aa
AA seq
DB search
MSDVSSKEIYEVKKTLKELEDKKGRGTELVSVYIPPEKQISDVAKQMRDELGQSANIKSK
QTRKNVQSAIEVIIQRLKLFPKPPEKGLVMFVGMIPKGGPGTEKMETYVFQPPEAVQTYT
YHCDSQFFVEPLKQIIEYKEVYGVVVLDRKESTIATLRGKRIDIIKHLTSGVPGKHKAGG
QSQRRFDRVIELAAHEFLKRIGRHVDEAFLPLKDELKGVLIGGPGHTKNDFVDGEYIHYE
IHDKIINIVDTSYTGDFGIREVIDESADTLDEMDIMQEKKFMRKFLTGLISESGLSTYGE
KEVRQNLQMGAVETLLISENLKSKRQTYTCPACNTVDVITTRQHQEPPEKRCPKCNEVMK
ITKTQETAEELIELAEEVKTHVEVISIETEEGTQLDKAFGGIAGILRYKVK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtatcatcaaaagaaatatatgaagtaaaaaagactcttaaagagttagaa
gataaaaaaggtagaggaacagaacttgtaagtgtttatataccacctgaaaaacagata
agtgatgttgcaaaacagatgcgtgatgaacttggacaaagtgcaaacattaaaagtaaa
caaacaagaaaaaatgtacaatcagctattgaagtaattattcaaagattaaaattattc
ccaaaaccaccagaaaagggacttgtaatgtttgtgggaatgattccaaaaggtggacct
ggtactgagaaaatggaaacatatgtattccaaccacctgaagctgttcaaacatacaca
taccactgtgatagtcagttttttgtagaacctctaaaacaaattattgaatataaggaa
gtttatggtgtagtagtactagatcgtaaagaatctacaattgcaacactaagaggaaaa
agaatagatattataaaacacttaactagtggtgttccaggaaaacataaagctggagga
cagtcacaaagaagatttgaccgtgtgattgaattagctgcacatgaattccttaaacgt
ataggaagacacgtagatgaagcatttcttccattaaaagatgaacttaagggtgttctt
attggtggaccaggccatactaaaaatgattttgttgatggagagtatatacactatgaa
attcatgataaaataatcaacattgttgacacatcatacactggagattttggtataaga
gaagttattgatgaatctgcagatacacttgatgaaatggatattatgcaagagaagaag
ttcatgagaaaattccttacaggacttatatctgaaagtggactttcaacttatggtgaa
aaagaagtaagacaaaatcttcaaatgggtgctgttgaaacattactcatatctgaaaat
cttaaaagtaaaagacaaacctacacttgtcctgcatgtaatacagtagatgttataact
actagacaacatcaagaacctccagaaaaaagatgtcctaaatgtaatgaagttatgaaa
ataactaaaacacaagaaactgctgaagaattaatagaattggccgaagaagttaaaaca
catgttgaagttatttctatagaaaccgaagaaggaactcaacttgataaggcatttggt
ggaattgctggtattttaagatataaagtaaaatag
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