Methanosphaera stadtmanae: Msp_1374
Help
Entry
Msp_1374 CDS
T00313
Symbol
rpoB1
Name
(GenBank) RpoB1
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mst
Methanosphaera stadtmanae
Pathway
mst03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Msp_1374 (rpoB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mst03021
]
Msp_1374 (rpoB1)
Enzymes [BR:
mst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Msp_1374 (rpoB1)
Transcription machinery [BR:
mst03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Msp_1374 (rpoB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zf_2nd_IFT121
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ABC57750
UniProt:
Q2NEK3
LinkDB
All DBs
Position
complement(1545416..1547227)
Genome browser
AA seq
603 aa
AA seq
DB search
MVKVKVYINGKLIGTTDEPEAFVKEVKARRRSNELTHELNITYYEENSEIFIFTDPGRAR
RPLVIVENGVSKLTDEIIDQVAAGELKWFDLIHKGIIEYIDAEEEENAYIAMFEDQLTED
HTHLEIDPSTMLGICAGIIPYANHNSSPRNTMEAGMTKQALGLYVSNYNLRTDTRAHLLH
QPQMPVVKTKSMVSTEYDKRPSGQNFVVAILSYQGCNMEDALVMNKAALERGLGRSSFFR
SYEASERRYPGGQEDHFEYPESMVRGYRSEEVYKHLDEDGLINPEVPVTSGDVLIGKTSP
PRFLEDVDEFGTVAERRRETSVTVRHGEHGIVDKVMLTETVEGSKLAKVKVRDHRQPEYG
DKFASRHGQKGVLGLIVPQENMPFNENGMCPDLMINPHAIPSRMSIGQIIEMLAGKAGCM
EGHRIDGTPFTGVPEDEIKRLLKENGFETHGREQLYNGITGERFKAEIFVGVAYYQKLHH
MTSDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDK
YEALLCGNCGRLAVRDKIRDRTYCAICGETETFPIEISYAFKLLLDELKSLCISPNLVLE
DKA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttaaagtttatataaatggtaaattaattggaacaacagatgaacctgaa
gcatttgtaaaagaagttaaagccagaagaagatctaatgaattaactcatgaattaaat
ataacatactatgaagaaaatagtgaaatatttatattcacagatcctggaagggcaaga
agaccattggtaatagttgaaaatggagtttcaaaactcactgatgaaattattgatcaa
gttgcagcaggagaactaaaatggtttgaccttattcataaaggaatcatagagtatatt
gatgctgaagaagaagaaaatgcatacattgcaatgtttgaagatcaattaacagaagat
catactcatcttgaaatagatccatcaacaatgcttggtatttgtgctggaattattcca
tatgctaaccataattcctcaccaaggaacacaatggaggcaggtatgacaaaacaggct
cttggattatatgtatcaaactataatttaagaactgatacaagagcacatctcttacat
caaccacaaatgcctgttgtaaaaacaaaaagtatggtttcaacagaatatgataaaaga
ccatctggtcaaaacttcgtagtagcaattctttcataccaaggatgtaatatggaagat
gctcttgttatgaataaagcagcattagaaagaggattaggtagatcttccttctttaga
tcatacgaagcatcagaaagacgttatcctggtggacaagaagatcactttgaatatccc
gaaagtatggtacgaggatatagatcagaggaagtatacaaacacttagatgaagatgga
cttatcaatccagaagtaccagtaacaagtggagatgtattaataggtaaaacatcacct
ccaagattccttgaagatgtggatgaatttggtactgtagcagaaagaagacgtgaaaca
agtgttacagtaagacatggtgaacatggtatagtagacaaagtaatgctaacagaaact
gttgaaggaagtaaattagcaaaagtcaaagtacgtgatcacagacaaccagaatatggt
gataaattcgcatcaagacatggtcagaaaggagtattaggtcttatagtacctcaagaa
aatatgcctttcaatgaaaatggtatgtgtcctgatttaatgataaatcctcacgcaatt
ccatcaaggatgtctattggacagattattgagatgcttgcaggtaaagctggttgtatg
gaaggacatcgtattgatggtacaccatttactggagtaccagaagatgaaatcaaacgt
ttacttaaagaaaatggttttgaaacacatggtcgtgaacaattatacaatggtataaca
ggtgaacgtttcaaagcagaaatctttgtaggagtagcatattaccagaaattacatcac
atgacttcagataaagtatatgcaagaagtagaggtccagtacaagttctcactcgtcaa
cctactgaaggtagagcaagagaaggtggacttagatttggagaaatggaacgtgactgt
ttaattgcacatggtgctgcactagcattaaaagaaagattactcgatgaatcagataaa
tatgaagcattgttatgtggaaattgtggtagattagcagtaagagataaaatacgtgat
agaacatactgtgcaatatgtggagaaacagaaacattcccaatagaaatatcatatgca
tttaaattgttacttgatgaattaaaatcattatgtatatctccaaatcttgtattagaa
gataaagcatag
DBGET
integrated database retrieval system
