Methanosphaera stadtmanae: Msp_1487
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Entry
Msp_1487 CDS
T00313
Name
(GenBank) predicted ssDNA-binding protein
KO
K07466
replication factor A1
Organism
mst
Methanosphaera stadtmanae
Pathway
mst03030
DNA replication
mst03420
Nucleotide excision repair
mst03430
Mismatch repair
mst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Msp_1487
03420 Nucleotide excision repair
Msp_1487
03430 Mismatch repair
Msp_1487
03440 Homologous recombination
Msp_1487
03460 Fanconi anemia pathway
Msp_1487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mst03000
]
Msp_1487
03032 DNA replication proteins [BR:
mst03032
]
Msp_1487
03400 DNA repair and recombination proteins [BR:
mst03400
]
Msp_1487
Transcription factors [BR:
mst03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Msp_1487
DNA replication proteins [BR:
mst03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Msp_1487
DNA repair and recombination proteins [BR:
mst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Msp_1487
MMR (mismatch excision repair)
Msp_1487
DSBR (double strand breaks repair)
HR (homologous recombination)
Msp_1487
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
Rep_fac-A_C
CDC24_OB3
REPA_OB_2
OB_Ssb-like
SHLD2_OB1
RADX_2nd
MlaD
POT1
OB_POT1A
Zn_Ribbon_TF
TEBP_OB2-like
Zn_ribbon_6
DUF5088
Motif
Other DBs
NCBI-ProteinID:
ABC57857
UniProt:
Q2NE96
LinkDB
All DBs
Position
1669064..1671445
Genome browser
AA seq
793 aa
AA seq
DB search
MTGENEDYIKERYQEVKEKVTYKDFLKDLEDIKIENVDAPFLTQQQLIDMVIEKYAEHEN
IQQTHTNQIQPISSLIEGNGNISIQGRLISISNIKTFTTKKGREGKVANLTVEDNSGKIR
VVMWTDNMKYMNRIEEGNIIKVNNLEVRKGYTGDLEVQMKNNSSIQVLPEEVDPSLPKYE
EKITNLSDITEDGEYNIIVRIKKISTLREIIKGEKTLQIITLEIMDKTGTLEFTLWNKDT
KLVDTLELKEHDTIKIIKARAQQRYDQITLSNSWNGRIIKNEYDVPDFEEEILKIGYAEE
KEDVTIIGTITKIYDTITFTKTDGNEGHVRSIEVTDETGSIRVTLWNKETEIEMRKGDII
KIEGGSIEFDDYAGDGYRLNTGWNASITINPELDTKLREKLELVDTIGIVKIENVLDLNE
DEGREVDVVGRIITTNDTREFERGDGSKGQIKSIELADETGIVRTSLWDEKVDITEKLGD
AIKIENARTRIGQGQMELSVGKSSRITTPTDEEIVNLPSYENIEQDRYNDRTISQLEENE
TNTKLRVRILNINEINTFTRTDGRDGRVRSIYVADETGEIQVSLWDDDTEIKFTKGSAII
IENPNITRQNTKLRLSIGNGSTIRAARQEEAEKMLSLTEIENKLYVEKYIEDIEEDDQHI
KIKGTISEINSEKIIYTMCPNCNIGITQDENGYICNECGEKIEKPNYLMIISTTLQDETG
TVQATFFRKDAEELISTTTEKVVAIYEQTGDESAMSSKLEDMIGHEVTIIANANFNEYDE
DIRLNVRQLVIVV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggagaaaatgaagactacataaaagaaagatatcaagaagttaaagagaaagta
acatacaaagacttcttaaaagatttagaagatataaaaatagaaaatgttgatgctccc
ttccttacacaacaacaattaattgatatggttatagaaaaatatgcagaacatgaaaac
atacaacaaacacatacaaatcaaatacaacccatatcttcacttattgaaggaaatgga
aatattagcatacaaggaagattaatatctatatccaacattaaaacatttacaacaaaa
aaaggtagagaaggaaaagttgccaatctaacagtagaagataatagtggaaaaatacga
gtcgtaatgtggacagacaatatgaaatacatgaatcgtatagaagaaggaaacattata
aaagtaaacaatcttgaagtaagaaaaggatacactggagatcttgaagtacaaatgaaa
aataactcatcaatacaagttttaccagaagaagtagatccatccctaccaaaatatgaa
gaaaaaataactaatctatcagacattactgaagatggtgaatacaacatcatagtaaga
atcaaaaaaatatcaacacttcgtgaaattataaaaggagaaaaaactctacagataatt
acattagaaataatggataaaacaggaacacttgaatttacactatggaacaaagataca
aaactagtagatacattagaactaaaagaacatgatactataaaaatcataaaagcaaga
gcacaacaaagatatgatcagataacattatccaatagttggaatggaagaattataaaa
aatgaatacgatgttccagattttgaagaagaaatcctaaaaataggctatgctgaagaa
aaagaagatgtaacaatcatagggacaataaccaaaatctatgatacaataacattcaca
aaaacagatggaaatgaaggacatgttagaagcatagaagtaactgatgagacaggatct
ataagagtaacactatggaacaaagaaacagaaattgaaatgagaaagggagatatcatc
aaaattgaaggaggatccatagaatttgatgattatgctggagatggatatagactaaat
actggctggaatgcatcaataacaattaaccctgaacttgatacaaaacttagagaaaaa
cttgaactagtagatacaattggaatagtaaaaatagaaaacgttctagatttaaatgaa
gacgaaggtagagaagtagatgttgttggaagaataattacaaccaatgatactcgtgaa
tttgaaagaggagatggaagtaaaggacaaataaaaagtattgaattagctgatgaaaca
ggaattgtaagaacatcactttgggatgaaaaagtagatatcactgaaaaacttggtgat
gcaataaaaatagaaaatgcacgaacaaggattggacagggtcaaatggaactaagtgta
ggtaaatcctcacgaataacaacacctacagatgaagaaatagtaaacctaccatcatat
gaaaacattgaacaagacagatacaatgatagaacaataagtcaacttgaagaaaatgaa
acaaacacaaaactcagagtaagaatccttaacatcaatgaaataaacacatttacaaga
acagatggaagagatggaagagtaagatcaatatatgttgctgatgaaactggtgaaata
caagtatcactctgggatgatgatacagaaataaaattcaccaaaggttctgcaatcata
atagaaaatccaaatataacacgacaaaacaccaaactaagattatctattggaaatgga
agtacaatacgtgcagcaagacaagaagaagctgaaaaaatgctttcattaactgaaatt
gaaaataaactctatgttgaaaaatacattgaagacatagaagaagatgatcaacatata
aaaattaaaggaaccatatcagaaattaatagtgaaaaaatcatctatactatgtgtcca
aattgtaatattggaataacacaagatgaaaatggatatatatgtaatgaatgtggagaa
aaaatagaaaaaccaaattatctaatgattatatcaacaacattacaagatgaaacagga
actgttcaagcaacattcttcagaaaagatgcagaagaacttataagcacaacaactgag
aaagttgtagcaatatatgaacaaactggagatgaatctgcaatgtcttcaaaacttgaa
gacatgattggacatgaagttacaataatagctaatgcaaactttaatgaatatgatgaa
gatattaggttaaatgtaagacaactagtaatagtagtataa
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integrated database retrieval system
