Methylomonas stagni: ACP4CD_07540
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Entry
ACP4CD_07540 CDS
T11652
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
msta Methylomonas stagni
Pathway
msta02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
msta00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACP4CD_07540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACP4CD_07540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msta03000
]
ACP4CD_07540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
msta02035
]
ACP4CD_07540
Transcription factors [BR:
msta03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACP4CD_07540
Bacterial motility proteins [BR:
msta02035
]
Flagellar system
Flagellar assembly proteins
Others
ACP4CD_07540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
FleQ
HTH_8
AAA_5
bpMoxR
AAA_16
AAA_7
AAA
HTH_50
TIP49
HTH_30
DBI_PRT
nSTAND3
Pre_tape_measure
AAA_2
Motif
Other DBs
NCBI-ProteinID:
XSR77487
LinkDB
All DBs
Position
complement(1605599..1607017)
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AA seq
472 aa
AA seq
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MALPEILLIDDNPVRVQQVETVLKFLEYRVYTLTVKEFETASDRCREADVVFVGGSNDKL
AILLKSVADAASGAPIVVLVEAGGQQQALATPVHQLVTKILEWPTVYPELIQLLDSFQPA
ESPKKSRSDKGLAGISRAIARTRELIDQVAKSDATVLILGESGTGKEVVAQALHRGSSRR
DKPFVPVNCGAIPGELLESELFGHEKGAFTGALTARQGRFELAEGGTLFLDEIGDMPMPM
QVKLLRVLQERTFERVGSNKTIHCDVRIVAATHRQLEQEIAEKRFREDLFYRLNVFPIEV
PALRERTEDIPYLVSDLISRMEAQNRGSVRLSPRAVAVLSQHHWPGNVRELSNLIERLAI
IKPDALVDTGDLPEKFQAYEIPDHLPATLPDQEIHVYRPAEHQGLGAAVPGGVGAIHLPE
QGIDLKEYLTELENELIRQALEECNGVVAHAAKLLNMRRTTLVEKLRKVDTA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggctttgccagaaattttactcattgacgacaaccctgttcgggtccagcaagtggaa
accgtactcaagttcttggaatatcgggtatacacccttacagtgaaggagttcgaaacc
gcatcggaccgatgccgagaggcggacgtggtgtttgttggcggctccaacgataaattg
gcgattctgcttaagtcggtcgctgatgccgcgagtggagcgccaattgtggtgttggta
gaggcaggaggccagcagcaggcgttagcgacccctgttcatcaattggtcaccaagatt
ctggaatggcccacggtctatcccgagttgattcaactgctcgatagttttcagcctgcc
gagtcgccgaaaaagtcgcgttccgataagggcttggccggcattagccgggcgatcgcc
cggacgcgcgaactgatcgatcaagtggccaaatccgatgccaccgtactgattttgggc
gagtcgggcaccggtaaggaggtggttgctcaagccttgcatcgcggctcttcccgtcgg
gacaaaccctttgtaccggtcaattgcggcgctatccccggcgagttgctcgaaagcgag
ctgttcggtcatgagaaaggtgcgtttaccggtgcattgaccgctcggcaaggccgattc
gaactggccgagggcggaactttgtttctcgatgagataggcgatatgccgatgcccatg
caggtcaagctattgagagtattgcaggaacgcactttcgagcgcgtcggcagtaataaa
acgatacattgcgacgtccgcatcgtagcggcaactcaccgtcaactggagcaggagatt
gccgaaaaacggtttagagaggatttgttttatcgcttgaacgtattccctatcgaagtt
ccggccttgcgcgaacgcaccgaggacattccttatctggtaagcgatctaattagccgt
atggaagcgcagaatcgcggttccgtcagattgagtcctcgcgcggtcgcggtcttatct
caacaccattggccgggcaacgtcagggaattgtcgaatttgatcgaacggctggccatc
attaagcccgatgcgttggtcgataccggcgatttgccggaaaagtttcaagcttacgaa
atacccgatcatcttccggcgactttgccggaccaggaaattcacgtataccgcccagcc
gagcatcagggtttgggtgcggcagtacctggtggcgtcggggcgatacacttgcccgaa
caaggtatcgatctaaaagaatatctgactgaactggagaacgaattgatccgccaggcg
ctggaagagtgtaacggcgtcgtagctcacgccgccaaattgctgaatatgcgtcgaacg
acattggtcgagaaattgcgtaaagtggatacggcataa
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