Methylomonas stagni: ACP4CD_18970
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Entry
ACP4CD_18970 CDS
T11652
Name
(GenBank) uracil-DNA glycosylase family protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
msta Methylomonas stagni
Pathway
msta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACP4CD_18970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msta03400
]
ACP4CD_18970
Enzymes [BR:
msta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACP4CD_18970
DNA repair and recombination proteins [BR:
msta03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACP4CD_18970
Prokaryotic type
ACP4CD_18970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XSR78361
LinkDB
All DBs
Position
complement(4109582..4110130)
Genome browser
AA seq
182 aa
AA seq
DB search
MVGPVVCCQPVMSKVMLIGQAPGGKEGQFGKPFAWTAGKTLFGWFGRLGLSEEQVRQRVY
MAAVCRCFPGKQAGGGDRVPSPAEIDHCSTWLRAEIELLQPQLIIPVGKLAIRQWLKADK
LSAIIGEQYRIEAFGHAADLIPLPHPSGASTWHRTEPGIGLLTKALAAIERHPAWQTIRP
ND
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcccggtggtttgttgtcagccggtgatgtcgaaggtgatgctgatcggccaa
gcgccgggcggtaaggaaggccagttcggcaagcccttcgcctggaccgccggcaaaacc
ttattcggctggttcggccggctggggttaagcgaagagcaggttcggcaacgggtgtac
atggcggcggtgtgccgctgcttccccggcaaacaggccggcggcggcgaccgggtgccg
agccccgccgaaatcgaccattgctcaacgtggctacgcgccgaaatcgaattattgcag
ccacaattgattattccggtcggcaaactggcgatccggcaatggctgaaggcggacaag
ctcagtgcgatcatcggcgaacaatatcggatcgaagccttcggccacgccgccgacctg
atcccgctaccgcatccctccggcgcctcgacctggcaccgcaccgagccgggcatcggc
ctgttgacgaaggcgctggctgcgatcgaacgtcatccggcttggcaaactatccgacca
aacgattga
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