Mycobacterium stephanolepidis: MSTE_01361
Help
Entry
MSTE_01361 CDS
T05257
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mste
Mycobacterium stephanolepidis
Pathway
mste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSTE_01361 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mste03019
]
MSTE_01361 (deaD)
03009 Ribosome biogenesis [BR:
mste03009
]
MSTE_01361 (deaD)
Enzymes [BR:
mste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSTE_01361 (deaD)
Messenger RNA biogenesis [BR:
mste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSTE_01361 (deaD)
Ribosome biogenesis [BR:
mste03009
]
Prokaryotic type
rRNA helicases
MSTE_01361 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
HEM4
P-loop_SecA
Surface-like_ins_dom
adh_short
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAX96690
UniProt:
A0A1Z4EUQ5
LinkDB
All DBs
Position
1331877..1333673
Genome browser
AA seq
598 aa
AA seq
DB search
MTSTDIPTPDTGESSAPRADDAVTFADLQIAPEVLRAVSDVGYETPSAIQAATIPPLLAG
SDVVGLAQTGTGKTAAFAIPILSKIDLTSKNTQALVLAPTRELALQVAEAFGRYGAHMPK
LNVLPIYGGQSYVVQLSGLKRGAQVVVGTPGRVIDHLERGTLDLSHLDYLVLDEADEMLT
MGFAEDVERILADTPEYKQVALFSATMPTTIRRLTKKYLHDPVEIKVEAKTSTAENITQR
FIQVAGPRKMDALTRILEVETFEAMIVFVRTKQATEEVAEKLKARGFAAAAINGDINQSQ
RERTINALKSGAIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSG
TAVLFVSPRERHLLKAIEKATGARLAEEPLPSVDDVNAQRVTKFRDAITAALAAPEIELF
RRLVEDYERDNNVPVADIAAALAVLSRDGEQFLLKPDPPRDPRHERGERPERGPREPRTQ
TPGLATYRIAVGKRHKVMPGAIVGAIANEGGLHRSDFGHITIRPDHSLVELPAKLSPKTL
KALESTRISGVLIELRPAGGADGARPARKFSDRKRPDHKHTDHKRSEAKRPKRSPKKP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacctctacagatatccccacgcccgacaccggcgaatcgagtgcaccacgcgcggat
gacgccgtcaccttcgcggacctacagattgcccccgaggtgctgcgtgcggtgtccgac
gtggggtacgaaacaccgtcggcgattcaggccgccaccatcccgccgctgctggcaggt
tcagatgtggtgggcctggcgcagaccggtaccgggaagacggcggcgttcgccatcccc
atcctctcgaaaatcgacttgacctcgaagaacacccaggccttggtgcttgcgcccaca
cgtgagctggcactgcaggtcgctgaggcgttcggccggtacggcgcccatatgcccaag
ttgaatgtgctgccgatctatggcggccagtcatatgtggtgcagctgtcgggcctgaag
cgaggggctcaggttgtggtcggcacaccggggcgtgtcatcgatcacctggagcgcggc
acgttggatctgtcgcacctggactatctggtgctggacgaggccgacgagatgctcacc
atgggcttcgccgaggatgtggaacgcatcctggccgacacccccgagtacaagcaggtg
gcgctgttctctgccaccatgcccaccaccatccgccgactgaccaagaagtacctgcac
gacccggtggagatcaaggtcgaggcaaagacgtccactgccgagaacatcactcagcgc
ttcatccaggtggccgggccccgcaagatggacgcgctcacccggatcctcgaggtcgag
acgttcgaggcgatgatcgtgttcgtcaggaccaagcaggccaccgaggaggtggccgaa
aagctcaaggcgcgcgggttcgccgcggcggcgatcaacggcgatatcaaccagtcgcaa
cgcgagcggaccatcaacgcgctcaagagcggggccatcgacattctcgtggccaccgac
gtcgccgcccgcggtctcgacgtcgagcgcatctcccacgtactcaactacgacatcccg
cacgacaccgagtcgtatgtgcaccgcatcggccgtaccggtcgggcgggacgctcgggt
accgcggtgttgttcgtctccccgcgtgagcggcatctactcaaggccatcgagaaggcc
accggtgccaggcttgccgaggagccgttgccgtcggtcgacgatgtcaacgcccagcga
gtgacgaagttccgtgatgccatcaccgctgcgctcgcggcaccggagatcgaactgttc
cgccggctcgtcgaggactacgagcgcgacaacaatgtgccggtggccgatatcgcggcg
gcgctggcggtactgtcgcgcgatggcgagcagttcctgctcaagcccgatccgcctcgc
gatcctcgccatgagcgtggggaacgccccgagcgcgggccccgcgagccgcgcacgcag
acccccggcttggcgacgtaccgcattgctgtcggcaagcggcacaaggtgatgcccggc
gccatcgtgggcgcgatcgcgaacgaaggcggtttgcatcgcagcgacttcgggcacatc
acgatccgtcccgatcactcgcttgtcgagctgcccgccaagttgtcgcccaagacgctg
aaggcactggagagcacccggatctcgggtgtgctcatcgaactgcgccccgcaggcggg
gccgatggtgcgcgcccggcccgcaagttctcggatcgcaagcgcccagatcacaagcac
acggaccacaaacggtcggaggcgaagcgtcccaagcggtcccccaagaaaccatga
DBGET
integrated database retrieval system
