Mycobacterium stephanolepidis: MSTE_02204
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Entry
MSTE_02204 CDS
T05257
Name
(GenBank) helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mste
Mycobacterium stephanolepidis
Pathway
mste03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mste00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSTE_02204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mste03019
]
MSTE_02204
03400 DNA repair and recombination proteins [BR:
mste03400
]
MSTE_02204
Enzymes [BR:
mste01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSTE_02204
Messenger RNA biogenesis [BR:
mste03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSTE_02204
DNA repair and recombination proteins [BR:
mste03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSTE_02204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
MarR_2
TrmB
Motif
Other DBs
NCBI-ProteinID:
BAX97518
UniProt:
A0A1Z4EX49
LinkDB
All DBs
Position
complement(2193966..2196074)
Genome browser
AA seq
702 aa
AA seq
DB search
MGQLNGARADQAREVIEALAGPGAVLREDQETAVTALLEPAARVLVVQATGWGKSAVYWV
ATAIRRAEGAGPALIVSPLLSLMRDQVAAAARAGLRAATLNSSNFDEWNAIEARLVAGDV
DVLLVSPERLANPSFGRRVLSALEGSMGLLVIDEAHAVSDWGHDFRPDYRRVSDVLTRMN
PSTPVLATTATANARVTEDVATQLGDATLVLRGPLARRSLQLNVLPPMSPLARYAWVAQH
LDELPGSGIVYVLTVADAQRLVNAIHAVHPEAKVAAYTGQLDADARARLEDALRENRIKA
LIATSALGMGFDKPDLGFVVHIGSPPSPVGYYQQVGRAGRAIDHAAVVLLPSESDAGIWD
YFTTASIPDSKQMDTVLTALAGETRDGEGSVSVNALEAKTGIRRTRIELMVKQLAVDGAV
ERVDGGWRSTGSPWHFDAEHYDGIIATRRREADIMRAYTRGERCLMQLLTESLDDPQAAS
CGQCSVCLGQTPDGLGLPASAELMQMVAATLRTDSTVLEPRKMWPGGEFGTRGKIPADLL
AEPGRVLVHADAPEWSGVIAAAVAGEPEAIEVLAQAAVSALARWRDEWVARPEIAVSLQL
TGTPNPVQPVTDRIATIGRLQRAVMPAVAGTAPGRDSSGGEEAAYWRDAIGTDESLREAI
NGRCVLLVTDSTSTRWPVTVAAAHLRKAGARAVLPLLIHHPA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggccaactgaatggggccagggcagatcaggcccgagaggtgatcgaggcgctggcc
ggtcccggtgcagtcctgcgggaagatcaagaaaccgcagtgacagcactactggagccc
gcggctcgggtgttggtggtccaagccacgggatggggtaaatccgcggtgtattgggtc
gcgacagccatccgacgcgccgagggcgccggtccggcactgatcgtctcgccgctgctg
tccctgatgcgcgaccaggtcgctgccgccgctcgggcagggttgcgagccgcgacgctc
aactcgtcgaacttcgacgagtggaatgcgatcgaagcacggctcgtcgccggtgatgtc
gatgtgcttctggtgtcacctgagcggctggccaacccctcttttggccgcagggtgctg
tcggcactcgaaggctccatgggtctgctggtcatcgacgaggcgcacgcggtatcggac
tggggacacgattttcgtcccgactaccgccgagtctccgacgtgctcacccggatgaat
ccgagtacgccggtactggccaccaccgccaccgcgaacgcgcgggtcaccgaggacgtg
gctacccagctgggcgatgccacccttgttctccggggaccgttggcccggcgttcattg
cagctcaacgtgttaccaccgatgtcgccgctggcacgctatgcgtgggtcgctcagcat
ctcgacgagctaccagggtcgggcattgtctacgtactgaccgtcgccgacgctcaacgg
ctggtcaacgccatccacgcggtacacccagaggcgaaagtcgctgcctacacgggccaa
ctcgatgcggacgcgcgagcacggctagaggacgcgctacgtgagaaccggatcaaggcg
ctgatcgccacgtctgccctggggatgggcttcgacaagcccgacctcggattcgtagtc
cacatcggctcaccgccatcgccggtcggctactaccagcaggtggggcgcgcggggcgc
gccatcgaccatgctgcagtcgtgctgcttccgtcggaatcagacgccggcatatgggac
tacttcaccaccgcttcgattccagattccaagcagatggacacagtgctcaccgctctc
gccggtgagacgcgcgatggcgagggatcggtatcggtaaacgcactcgaggccaagaca
ggtattcggcgcacacgaatcgagctcatggtcaagcagctcgccgtcgacggtgcggtg
gagcgggtcgacggcggctggcgatccaccggtagcccttggcatttcgacgcagagcat
tacgacggcatcattgccactcgccgccgcgaggccgacatcatgagggcctatacacgt
ggagaacgctgcctcatgcagctgctcacagaatcgctcgacgatccccaggccgcatcg
tgtggacagtgctcggtgtgcctcgggcagacacccgatgggcttgggctgcccgcctcc
gccgagctgatgcagatggtcgccgccaccctgcgcaccgactccacggtgcttgaaccc
cgaaagatgtggcctggcggagagttcggcacccgcggcaagattccggcggacctgctc
gccgagccgggccgcgtgctggtccatgccgacgctccagagtggagcggggtaatcgcc
gctgcggtagcgggcgagcccgaggcgatcgaggttctggcccaggccgcggtttccgct
ctcgctcgatggcgcgacgaatgggtcgcccgccccgaaatcgcggtgtcgctgcagctg
accggcacgcccaatccggtgcagcccgtgactgaccgaattgccacgatcggtcgccta
cagcgcgcggtgatgccggcggttgcgggtacggcgcccggccgtgattcgtccggcggc
gaggaagccgcctattggcgtgacgcgatcggcacggacgagtcgctccgggaggcgatc
aatggccggtgcgtgctgctggtgacggactcgacgtccacccggtggcccgtcaccgtg
gccgccgctcatctgcggaaagccggggcgcgagcggtactgccgctgctcatccaccac
ccagcctga
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