Mycobacterium stephanolepidis: MSTE_03918
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Entry
MSTE_03918 CDS
T05257
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mste
Mycobacterium stephanolepidis
Pathway
mste03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mste00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MSTE_03918 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mste03021
]
MSTE_03918 (rpoA)
03400 DNA repair and recombination proteins [BR:
mste03400
]
MSTE_03918 (rpoA)
Enzymes [BR:
mste01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MSTE_03918 (rpoA)
Transcription machinery [BR:
mste03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MSTE_03918 (rpoA)
DNA repair and recombination proteins [BR:
mste03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MSTE_03918 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAX99216
UniProt:
A0A1Z4F1Y3
LinkDB
All DBs
Position
complement(3886695..3887747)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLSEESLAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKSLVVSSEEDEPVTMYLRKQGPGAVTAGDIVPPAGVTVHN
PDMHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYNVDA
TRVEQRTDFDKLVLDVETKNSITPRDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFALPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKIK
LHQLGLSLKDSPTSFDPSEVAGYDVATGTWSDTGSYDFEGDQDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctgatttctcagcgaccgacactgtccgaagaatcgctggccgagaaccggtcgcgc
ttcgtcatcgagcccctggagccgggattcggctacaccctgggcaactcgctgcggcgc
accttgctgtcgtccatcccgggcgcggcagtcaccagcatccggatcgacggcgtgctg
catgagttcaccaccgttcccggggtgaaggaagacgtcaccgacatcatcctgaacctc
aagagcctcgtggtgtcctcggaagaggacgagcccgtcaccatgtacctgcgtaagcag
ggaccgggagccgtcaccgccggtgacatcgtgccgcccgccggtgtgaccgtgcacaac
cccgatatgcacatcgcgaccctgaacgacaagggcaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgtcccggccgtgcagaacaaggcctcgggtgccgagatcggc
cgtatccccgtcgattccatctactcgccggtgctcaaggtgacgtacaacgtcgacgcg
acccgtgtcgagcagcgcaccgacttcgacaagctggtgctggacgtcgagaccaagaac
tcgatcaccccgcgtgacgcgctggcctcggccggtaagacgctggttgagctgttcggg
ctggcccgtgagctcaacgtcgaggccgagggcatcgagatcgggccgtcgcctgccgag
gcagaccacatcgcctcgttcgcgctccccatcgaggatctggatctgaccgtccggtcg
tacaactgcctcaagcgcgagggtgtgcacaccgtcggtgagctggttgcccgcaccgag
tcggacctgctggacatccgcaacttcggtcagaagtccatcgacgaggtgaagatcaag
ctgcatcagctcggcctgtcgctcaaggacagcccgaccagcttcgatccttccgaggtc
gccgggtacgacgtcgccaccggcacgtggtcggacaccggttcgtatgacttcgagggc
gatcaggacttcgccgaaaccgaacagctctaa
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