Methanospirillum stamsii: ACKUB1_05860
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Entry
ACKUB1_05860 CDS
T11318
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mstm Methanospirillum stamsii
Brite
KEGG Orthology (KO) [BR:
mstm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACKUB1_05860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mstm03021
]
ACKUB1_05860
Transcription machinery [BR:
mstm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ACKUB1_05860
Prokaryotic type
Archaeal type
TFB
ACKUB1_05860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Cas12f1-like_TNB
Zn_ribbon_LysW
Ribosomal_S27e
Zn_ribbon_SprT
Lar_restr_allev
HTH_AsnC-type
UPF0253
TackOD1
DUF6671
Trm112p
Rok_N
FtrD-like
DZR
Zn_ribbon_Elf1
DUF5817
Zn_ribbon_IS1595
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
XLV66325
LinkDB
All DBs
Position
complement(1218162..1219175)
Genome browser
AA seq
337 aa
AA seq
DB search
MSEEIEKLRTLQKEREALKNRLTGKVVEKQKKIENQTESQCPECGSRQLVHDYERAELVC
QQCGLVIDAEFIDRGPEWRAFDHDQRMKRSRVGAPMTFTIHDKGLSTMIDWRNRDSYGRA
ISSKNRAQLYRLRKWQRRIRVSNATERNLAFALSELDRMASALGLPRNVRETAAVVYRDA
VDKNLIRGRSIEGVAAAALYAACRQCSVPRTLDEIAEVSRVSRKEIGRTYRFISRELGLK
LLPTSPIDYVPRFCSGLQLKGEVQSRAVEILRQAGERELTSGRGPTGVAAAAIYISSILG
GERRTQREVAEVAGVTEVTIRNRYKELAEKLDIEIIL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagagatagaaaaactccggacccttcagaaagagcgggaagccctgaaaaac
agactgaccggaaaggtagttgagaaacagaaaaaaatagaaaaccagaccgaatctcaa
tgtcctgagtgtgggagcagacaacttgttcatgattatgaacgggcagaacttgtctgt
cagcagtgtggtctggttattgacgccgaatttatcgacagaggtcctgagtggcgtgct
tttgatcatgaccagcggatgaaacggtcacgtgttggagctccgatgacctttaccatc
catgataagggtctctctaccatgattgactggagaaaccgggacagttatggaagagcg
atatcatcaaaaaaccgtgcacaactctaccgtctgcgtaaatggcagcgtcgtatcagg
gtaagtaatgcaaccgaacgaaaccttgcatttgcattatctgaacttgaccggatggct
tctgcactgggtcttcccagaaatgttcgtgaaacagctgcagtggtatatcgtgatgcg
gtcgataaaaacctcatccgtggtagaagtatagagggagtagcagcagctgcattatat
gcagcatgtcgtcaatgtagtgttccaagaacccttgacgagatagcggaagtatcacgg
gtttcaagaaaggaaattggcagaacataccggtttatatcccgtgaacttggattgaaa
cttctcccgacctccccaatcgactatgttccccggttctgttccggactgcaactcaaa
ggtgaagtgcagagcagagctgttgaaattctgagacaggcaggtgagcgtgaacttact
tcaggaagggggccaaccggagttgctgcagctgcaatctatatctcttcaatactcggt
ggtgagcgaagaacacagcgtgaagtagctgaagttgcgggcgttaccgaagttaccatt
agaaaccggtataaggaactggcagaaaaactggatatagaaataattctctga
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