Methanospirillum stamsii: ACKUB1_10170
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Entry
ACKUB1_10170 CDS
T11318
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit B
Organism
mstm Methanospirillum stamsii
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GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
DUF1451
Zn_ribbon_FGT1_1
Zn_ribbon_RPAB4
DUF5817
Motif
Other DBs
NCBI-ProteinID:
XLV63610
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Position
2077906..2079726
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AA seq
606 aa
AA seq
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MISSQSRVFVDGALIGLVDDPRELVGKIRAMRRQGVISTEVNCSYKEFNGDVIIHTDRGR
ARRPLIVLQDGVPIIPDEEVQKLKNKEIEFPDLIKKGYIELIDAEEEEDLNIAIKPENIT
PLHTHLEVDPSLILGIGAAHVPFPEHNASPRVTMGAGMVKQALGFGCANMKLRPDTRGHL
LHYVQKPLVYTQTSDVIGSDDRAAGQNFVVAILSYEGYNIEDALIFNQASIDRGVGRSHF
FRTYEGEERRYPGGQIDRIEVPDEDVTGAHGSDYYSNLDDDGIINPETIVREKDVIIGKT
SPPRFLEEPTSELITVEKRRDTSVTMRSNEHGIVDTVILTEGENNSKLVKVRTRDLRVPE
VGDKFASRHGQKGVVGLITPAVDMPFTAAGLTPDLVINPHAIPSRMTIGHMLEMLGGKVG
SLEGRRISSTAFSGEREETLRASLKKFGFSHTGREAMWDGITGRRFFADIYVGVIYYQKL
YHMVSSKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVMIGHGAAMALKERLLEES
DKVSEFVCAKCGMIAMLDRKQNITRCLNCGSETDIYPVEMSYAFKLLLDEMKSMTIAPRL
KLEDVV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgatctcttcacagtcccgggtttttgttgatggtgctctcattggtcttgtagatgac
ccccgcgaacttgttgggaaaatcagggcaatgaggcgtcagggcgttatctcgaccgaa
gtgaactgctcttataaagagttcaacggcgacgttatcattcataccgatcgtggccgg
gcccgaagacctctcatcgtcctgcaggacggagttccgataatccctgatgaagaagtg
cagaaacttaaaaataaagagattgagtttcctgatcttatcaaaaagggatatattgaa
cttatcgatgcagaagaggaagaagatctcaacattgcaataaaaccggagaatatcact
cccctgcacactcatcttgaggttgatccttctcttattcttggaatcggtgctgcccac
gtcccgttcccggaacacaatgcatctccccgtgttaccatgggagcaggaatggtcaag
caggcactcggatttggctgcgcaaatatgaaactccggccggatacccgtggtcacctg
cttcattatgttcaaaaacctctcgtatatactcagacctctgatgtaatcgggtctgat
gaccgggcagcaggacagaattttgttgttgccatcctttcttacgagggttataatatt
gaagatgctctgatttttaatcaggcgtctattgaccggggtgtcggacgttcacacttt
ttcaggacatatgaaggtgaagagcgtcggtatcctggtggtcagattgaccgtattgag
gttccggacgaagatgtaaccggagctcatggttctgattattactccaaccttgatgac
gatggaatcatcaatccggaaaccatcgtgagggaaaaggacgttatcattggaaagacc
tctccaccccggttccttgaagaaccgacatcagaacttataaccgtagaaaagcgtcgt
gacacgtcggttaccatgcgttccaatgaacacggtattgttgacacggttatcctgacc
gaaggagaaaataattccaaattggtcaaggtcagaacccgtgatctccgtgttccggaa
gtcggtgataagttcgcatcccgtcatggtcagaaaggagtggtaggtctcatcactccg
gcagttgacatgccatttactgcagcgggcctgacaccggatcttgtaattaatccccat
gcaattccgtcccgtatgaccatcggtcacatgcttgagatgcttggagggaaagtgggt
tcccttgaaggaaggcgtatttcgagtactgcattctccggtgaacgtgaagagaccctt
cgtgcctccctgaaaaagttcgggttttcacacaccggacgtgaagcaatgtgggatggc
atcaccggaagacggttctttgcagatatctatgtcggtgtcatctactatcagaaactg
taccacatggtttcatccaagatgcatgcccgttccaggggtccggtgcaggttcttacc
cgtcagccgactgaaggtcgtgcccgtgaaggaggtcttcgtttcggagaaatggagcgt
gatgtgatgattggtcatggagcagccatggctctcaaagaacgtctgctcgaagaatct
gacaaagtatccgagtttgtttgtgcaaagtgtggaatgatcgccatgctggaccgcaag
cagaatatcacccggtgcctgaattgtggcagtgagaccgatatctacccggttgaaatg
tcctatgcgttcaaactgctcctcgatgagatgaagagtatgaccatcgctccccgtctc
aaacttgaggatgttgtttaa
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