Mycobacterium stomatepiae: MSTO_15520
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Entry
MSTO_15520 CDS
T07145
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
msto
Mycobacterium stomatepiae
Brite
KEGG Orthology (KO) [BR:
msto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msto03016
]
MSTO_15520
Enzymes [BR:
msto01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MSTO_15520
Transfer RNA biogenesis [BR:
msto03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MSTO_15520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBY21347
UniProt:
A0A7I7Q5P0
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All DBs
Position
1564182..1565459
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AA seq
425 aa
AA seq
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MGEPADRRPDGTAPDSSAPESTPLLHPAEGIPDLSVTVHQIADAAQFLAGGHGPFAVDAE
RASGFRYSNRAYLIQIRRAGAGTVLIDPVSHGADPLTALRPVAEVLGTDEWILHAADQDL
PCLAEVGMHPPALYDTELAGRLAGFERVNLAAMTERLLGQGLVKGHGAADWSKRPLPTEW
LNYAALDVELLVELRAAISAELAEQGKTDWAAEEFDYLRSAGSREATPRRDRWRRTSGIH
RVRDRRGLAAVRELWTTRDNIAQRRDIAPRRILPDSAIIEAAIANPKTVEDLVALPVFGG
RNQRRSAATWLSALEAARESQDQPEDAEPANGPPPPARWSRRKPEAAARLEAARAGLSEL
SERLKIPTENLVSPDLVRRLCWDWADAPDPVEAVEQFLCAGQARAWQRALVDPVLATALQ
PPPKA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaccggcggaccgcaggcccgacggcaccgcgcccgatagcagcgcgccggag
tccaccccgctgctgcacccggccgagggcatacccgacctgtcggtgacggtccaccag
atcgcggacgccgcgcaattcctcgccggcgggcatgggccgttcgcggtggacgccgag
cgggcgtcgggtttccgctactccaaccgggcctacctgatccagatccggcgggccgga
gccggcaccgtgctcatcgacccggtcagccacggcgccgatcccctgaccgcgctgcgg
cccgtcgccgaggtgcttggcaccgatgaatggatcctgcacgcggctgatcaggatctg
ccctgcctggccgaggtcggcatgcacccgcccgcgctctatgacaccgagctcgccggg
cgcctggccggcttcgagcgggtgaacctcgcggcgatgaccgaacggctgctgggccaa
ggtctggtcaagggccacggcgcggccgactggtccaagcggccgctgcccaccgagtgg
ctcaactacgcggcgctcgacgtggaactgctggtcgaactgcgcgcggcgatctccgcg
gagctggccgagcaaggcaaaaccgattgggccgcagaggaattcgattatctgcgcagt
gcgggcagccgggaggccacgccgcggcgggaccgctggcggcgcacgtcgggcatccat
cgggtacgcgaccgccgcggtctggccgcggtgcgcgaactgtggaccacccgcgacaac
atcgcccagcgccgcgacatcgcgccgcggcgcatcctgccggattcggccatcatcgag
gccgcgatcgccaatccgaagacggtcgaagacctggtcgcgttgccggtgttcggcggg
cgcaaccagcgccgcagcgcggcaacgtggttgagcgcgctggaagccgcccgcgagagt
caggaccaaccggaagacgccgagcccgcgaacgggccgcccccgccggcgcggtggagc
agacgcaaaccggaggcggccgcgcggctggaggcggcccgggccgggctatcggaactg
tcggagcggctgaagattccgaccgagaacctggtctcgcccgacctggtgcggcgtctg
tgctgggactgggccgacgcgccggacccggtcgaggccgtcgaacagttcttgtgcgcc
ggccaggcacgggcctggcagcgcgcgctcgtcgatcccgtgctggcgacggcgctgcag
ccgccgcccaaggcctag
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