Mycobacterium stomatepiae: MSTO_53110
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Entry
MSTO_53110 CDS
T07145
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
msto
Mycobacterium stomatepiae
Pathway
msto03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msto00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MSTO_53110 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msto03019
]
MSTO_53110 (deaD)
03009 Ribosome biogenesis [BR:
msto03009
]
MSTO_53110 (deaD)
Enzymes [BR:
msto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MSTO_53110 (deaD)
Messenger RNA biogenesis [BR:
msto03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MSTO_53110 (deaD)
Ribosome biogenesis [BR:
msto03009
]
Prokaryotic type
rRNA helicases
MSTO_53110 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
HEM4
adh_short
CMS1
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BBY25106
UniProt:
A0A7I7QGN0
LinkDB
All DBs
Position
5361030..5362748
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AA seq
572 aa
AA seq
DB search
MTVPDGPPAAAATSFADLQIHPDVVRALADVGYESPTGIQAATIPALMAGSDVVGLAQTG
TGKTAAFATPILSKIDVTNKATQALVLAPTRELALQVAEAFSRYGAHLPQLNVLPIYGGA
SYGVQLAGLRRGAQVVVGTPGRVIDHLERGTLDLSRVDYLVLDEADEMLTMGFAEEVDRI
LSETPEYKQVALFSATMPPAIRKITAKYLHDPFEVTSKAKTATAENISQRFIQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIAQAQRERTVAALKD
GSIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQSLTEAELPTVEDVNAQRVAKFADSITGSLGNPGIELFRKLVQDYERE
HDVPMADIAAALAVQSRDGEEFLMSPEPPRQRRERPERDGDRRERPEKSRGIRSFQTYRI
AVGKRHKIGPGAIVGAIANEGGLHRSDFGHIAIGPDFSLVELPAKLSASTLKRLEKTRIS
GVLIDLKPDRSSGKSAEKPGHGGPKRRRKDAG
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccccgacggcccgccggcagcggccgctacttcgtttgctgacctgcagatt
catcccgatgtggtgcgggcccttgccgacgtcggctacgagtcgccgacgggaatccag
gctgcgacgattccggcgctgatggcggggtcggacgtggtcggcctggcgcaaaccggc
acgggtaagacggcggcttttgccacgccgatcctgtcgaaaatcgacgtcaccaacaag
gcgacccaggccctcgtcctggcgcccacccgcgaactggccctgcaggtggccgaggcg
ttcagccgatacggggctcacctgccacagctcaatgtgctgccgatctacggcggagcg
tcctacggcgtacagctggcagggctgcggcgcggcgcacaggtggtggtcggcacgccc
ggtcgcgtcatcgaccacctcgaacgcgggacgctcgatctctcccgggtggactacctg
gtgctcgacgaggccgacgagatgttgaccatgggcttcgccgaggaagtcgaccgcatc
ctgtccgagacaccggagtacaagcaggtggccctgttctcggcgaccatgccaccggcg
atccgcaagatcaccgccaaatatctgcacgacccgttcgaagtcacctctaaagcgaaa
accgcgaccgccgagaacatttcgcagcgcttcattcaggtcgccgggccgcgcaagatg
gacgcgctgactcgggtgctggaagtcgagccgttcgaggcgatgatcgtattcgtgcgc
accaagcaggccaccgaggaggtcgccgaaaagctgcgcgcccgaggtttttccgcggcc
gctatcaacggcgatatcgcgcaggcccagcgcgagcgcaccgtcgccgcgctcaaggat
ggcagcatcgacatcctggtcgccaccgacgtggcggcccggggcctggacgtggaacgc
atctcgcatgtgctcaactacgacatcccgcacgacaccgagtcctacgtccaccgcatt
gggcgcaccggccgggccggccgttcgggcaccgcgctgctgttcgtctcgccgcgggag
cgccatctgctcaaggcaattgagaaagcgacgcggcaaagtctgaccgaggcggaactg
ccgaccgtggaagacgtcaacgcgcagcgggtggcgaaattcgccgactccatcaccggc
tcgctcggcaacccgggcatcgagctgttccgcaagctggtgcaggactacgaacgcgag
cacgatgttccgatggccgacatcgccgcggcgttggcggtgcagtcgcgcgacggtgaa
gagttcctgatgtcgcccgaaccgccacgccagcgtcgtgagcggcccgaacgtgacggc
gaccgtcgggagcgccccgaaaagtcaaggggcatacggtcattccagacctatcggatc
gccgtcggcaagcgtcacaagatcggcccgggcgcgatcgtcggagccatcgccaacgag
ggcggcctgcatcgtagcgatttcggccacatcgcgatcgggcccgacttctcgttagtg
gagctgcccgcgaagctgtccgcttcgacgctgaaaaggcttgagaaaactcgtatctcg
ggtgtgctgatcgacctcaagccggaccgctcgtccggcaagtccgctgagaagcccggt
catggtgggcccaagcggcgcagaaaagacgctggatga
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