Mycoplasma struthionis: EGN60_02790
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Entry
EGN60_02790 CDS
T06913
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mstr
Mycoplasma struthionis
Pathway
mstr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mstr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EGN60_02790 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mstr03021
]
EGN60_02790 (rpoC)
03400 DNA repair and recombination proteins [BR:
mstr03400
]
EGN60_02790 (rpoC)
Enzymes [BR:
mstr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EGN60_02790 (rpoC)
Transcription machinery [BR:
mstr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EGN60_02790 (rpoC)
DNA repair and recombination proteins [BR:
mstr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EGN60_02790 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AZG68864
UniProt:
A0A3G8LHM5
LinkDB
All DBs
Position
complement(618668..623110)
Genome browser
AA seq
1480 aa
AA seq
DB search
MKKNSKYESLDEERITRISLALATPEDVEKWSHGEVTKPETINYKSYKPERGGLFDEIIF
GPMIDYRCPVCGYKYKKINEGSYCTRTELCKRENVQILPKIARRNHMGHIKLNSPVVHFW
YFKVDHSILYKLLGLRSSNGSDTVRREELENLIYYKSHIVLEDGGLKSLPKNQIIEINEA
AIIYKAALEELIQRFEKGSEEYEDIHETLEALVEKATSKIGQEYGIDFYELNEVIEHYSN
AKIGTGALAIEYLLKKLDLRAEKAYVSGEIEKLNLEENANPERFASTSRQSREKLYKRLQ
VINAFIESKQDPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLQQW
QEKDAPTLVLQNELRMIQEAVDALIDNQRRTPNPVLSKDNRPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIVVGPTLKMHQCGIPREMAAKLFEPWIIARLIEKEVATTIKNAKKII
EDQNPIIWPHVAKAIEGKLVLLNRAPTLHRLSIQAFEPVLVRGKAIRLHPLVCTPFNADF
DGDQMAVHVPISEKALLESRELMLANKNILGPKDGEPIINPSQDMVLGLYYLTIEESEAL
GEGRVFDNYEHMMRAYEAKKVSLHARVALPANEVKASKLFVPHPKQQYVISTVGKFIFNR
IFPETFPFIYDNKVNKATSLDEYSIGFSRYVVPAGTNIPNYIKFELSILEAFNKKNIAKI
IRFAFDKYVATISMSDVAKVIDLLNDNIDPNDSMIYYLELKTYENKKINGEHAILLSKFT
AEEKARVEQLNPERINSRTFIPLTAEEKAKILDGVWFKYTNIVASILDDIKQLGFDYSTI
SGISISFSDILETDKKQEYIAEGDEYINQLKNYYNLGWITDDDRYSLTIKKWAEVKDKIQ
AELQQIIKENPQNSVITMINSGARGNISNFVQLAGMRGLMANNTKTTKADAKNDRVVRST
VEVPVKSSFIEGLTGFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVREKNC
GSDYGYVAKDIIDTKTKQTIVSLRERIIGRFTNKPIINSKGITICDRNELISEEKAQIII
KDNIKEVEIRSILGCNTRNGVCKMCFGKDLATNRVVNIGEAVGIIAAQSIGEPGTQLTMR
TFHTGGVAGVEDITGGFTRLIELIDAHEQPWGRPATISPYQGYVTEIKVDEKNNTLYYVT
IETRNKKRQVIATHTLEVNTTKKLRVKEGDFVKIGQKLSEGPIILKELLNLTDTITVQNY
LLKEIQRIYRIQGIAISDKYIEIIIRQMMSKIIISDPGDSKFFAGAIVDIFDYQEENAHL
LTKNLRPAYGKVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRSDNLTGLKENII
VGKKIPSGTSLYPFEEHSKYDIRPSISYFKTQIEENEEDDSDTEELDIESLTNQFVNDFS
TSEDYLEDEENQEDYENDDDSLDVNEDSENLDDNYSDDEE
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaattcaaaatacgaatctttagatgaagaaagaataactagaatttcatta
gcattggctactccagaagatgttgaaaaatgatctcatggtgaagttacaaaaccagaa
actattaactacaaaagctataaaccagaacgaggtgggctatttgatgaaataattttt
ggtccaatgattgactaccgttgtccagtttgtggatataaatacaaaaaaattaatgaa
ggtagttactgtacaagaactgaattatgtaaaagagaaaatgttcaaattttacctaaa
atagcaagaagaaatcacatgggtcatattaaattaaatagccctgttgttcacttttga
tattttaaagttgaccactcaattttatataaattattaggtttacgttcatcaaatggt
agcgatactgttagaagagaagaattagaaaacttaatttattacaaaagccatatagtt
ttagaagatggtggactaaaatcattacctaaaaatcaaataattgaaattaatgaagct
gctattatatataaagcagctttagaagaattaattcaaagatttgaaaaaggtagcgaa
gaatatgaagatattcatgaaaccttagaagcattagtagaaaaagctacttcaaaaatt
ggtcaagaatatggaattgacttttatgaattaaatgaagttattgaacattattcaaat
gcaaaaattggtacaggtgctttagctattgaatatttattaaaaaaattagatttaaga
gctgaaaaagcatatgtttctggagaaattgaaaaattaaatctagaagaaaatgcaaac
cctgaaagatttgcatcaacttcacgtcagagtcgtgaaaaattatataagagactacaa
gttattaatgcatttattgaatcaaaacaagatccaacaagtatgttaatttataactta
cctgttattccagctgatttaagacctttaattcagttagatggtggtcgtcactcaact
tctgatattaacgaattataccgtcgtgtaattattagaaataaccgtctacaacaatga
caagaaaaagatgctcctactttagttttacaaaacgaacttagaatgattcaagaagca
gttgatgcattaattgataaccaaagaagaacaccaaatcctgttttatcaaaagacaat
cgtccatttaaatcaatttcagatgctttaactggtaaaaaaggtcgttttagacaaaac
ttattaggtaaacgggtagactattcaggtcgttctgttatcgttgttggacctacttta
aaaatgcatcaatgtggtatacctcgtgaaatggctgcaaaattattcgaaccttgaata
attgcgcgtctaattgaaaaagaagttgctacaactattaaaaacgctaaaaaaataatt
gaagatcaaaatccaattatttgacctcacgttgcaaaagcaattgaaggaaaattagtt
cttttaaaccgggcacctactttacatagactttcaattcaagcttttgaacctgtttta
gtacgtggtaaagctattagattgcacccattagtatgtaccccatttaacgctgacttc
gatggtgaccaaatggctgttcacgttcctatttctgaaaaagcacttttagaaagtcgt
gaattaatgttagctaataaaaacattttaggtcctaaagatggtgaacctattattaac
ccatctcaagatatggttttaggtttatactacttaacaatagaagaaagtgaagcttta
ggtgaaggaagagtgtttgataattatgaacacatgatgagagcatatgaagctaaaaaa
gtttcattacatgctagagttgctttaccagcaaatgaagtaaaagcatctaaattattt
gttcctcatcctaaacaacaatatgtaatttcaacagttggtaaattcatttttaataga
attttccctgaaacattcccatttatttacgataataaagtaaataaagcaacttcatta
gatgaatatagtattggtttttcacgttatgtagttcctgctggtacaaatattccaaat
tacattaaatttgaactttcaattttagaagcatttaataaaaagaatattgctaaaatt
attcgttttgcttttgataaatacgttgcaacaatttcaatgagcgacgttgcaaaagta
atcgatcttttaaatgacaacatagatccaaatgattcaatgatttattatttagaacta
aaaacatacgaaaacaaaaaaatcaatggtgaacatgctattctactttctaaatttaca
gctgaagaaaaagctagagttgaacaacttaacccagaaagaatcaattcaagaactttc
attcctttaacagctgaagaaaaagctaaaattttagatggtgtttgatttaaatataca
aacattgttgcatctattctagatgacattaaacaattaggatttgattattcaacaatt
tcaggtatttcaatttcattctctgatattttagaaactgataaaaaacaagaatatata
gcagaaggtgatgaatacattaatcaacttaaaaattactacaatttaggttgaattact
gatgatgatcgttactcattaacaattaaaaaatgagctgaagtgaaagataaaattcaa
gctgaacttcaacaaattattaaagaaaacccacaaaactcagttataactatgattaac
tcaggggctcgtggtaatatttctaacttcgttcaattagctggtatgcggggattaatg
gctaacaacaccaaaactaccaaagccgatgctaaaaacgatagagttgttagatcaaca
gttgaagttccagttaaatcatcatttattgaaggtctaacaggatttgaattctattca
tcaactcacggggctcgtaaagggttaaccgatactgccttaaacactgcaaaatctggt
tatttaacacgtagactagttgacgttgctcagaatatagttgttagagagaaaaactgt
ggttctgattatggttatgtagcaaaagatataattgatacaaaaacaaaacaaaccatc
gtttcattaagagaaagaataattggtcgttttacaaataaaccaattataaattcaaaa
ggtatcacaatttgtgatagaaatgaattaataagcgaagaaaaagcacaaattattatt
aaagataatataaaagaagttgaaattagatcaattcttggttgcaacactagaaatggt
gtatgtaaaatgtgttttggtaaagacttagcaacaaatagagttgttaatatcggtgaa
gcagttggtattatcgctgctcaatcaatcggtgaacctggtactcagctaaccatgaga
accttccatactggtggggttgctggtgttgaagatattactggtggttttactagatta
attgagttaatcgatgctcacgaacaaccatgaggtcgtcctgcaactatttctccatat
caaggttatgtaactgaaattaaagtagatgaaaaaaataatactttatactatgtaact
attgaaacaagaaataaaaaacgtcaagttattgcaactcatactttagaagttaataca
actaaaaaattaagagttaaagaaggcgattttgtaaaaataggtcaaaaactttcagaa
ggtcctattattctaaaagagttattaaacctaactgatacaattacagttcaaaactac
ttattaaaagaaattcaaagaatttacagaattcaaggtattgcaatttctgataaatat
attgaaattattattcgtcaaatgatgtcaaaaattatcatctcagatccaggagattca
aaattctttgctggagctattgtagatattttcgattatcaagaagaaaatgctcattta
ttaacaaaaaatctaagaccagcatatggaaaagttgttattaaaggtgctaaacaagtt
cctttattatctgactcattcttagctgctgcttcatatcaagaaacaagcaaaatctta
gttcatgccgctatttcatcacgttcagataatttaactggattaaaagaaaacattatt
gttggtaaaaaaataccttcaggaacctctttatatccatttgaagaacactctaaatat
gatattagaccatcaatttcatatttcaaaactcaaatagaagaaaatgaagaagatgat
tctgatacagaagaactagatattgaatcattaacaaaccaatttgtaaatgatttttca
actagcgaagattatttagaagatgaagaaaatcaagaagattatgaaaacgatgatgat
agtttagatgttaatgaagatagtgaaaacttagatgataattacagtgatgatgaagaa
taa
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