Mannheimia succiniciproducens: MS0480
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Entry
MS0480 CDS
T00201
Symbol
thdF
Name
(GenBank) ThdF protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
msu
Mannheimia succiniciproducens
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msu03016
]
MS0480 (thdF)
Transfer RNA biogenesis [BR:
msu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
MS0480 (thdF)
Prokaryotic type
Methyltransferases
MS0480 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Ras
Dynamin_N
Arf
AIG1
GTP_EFTU
ABC_tran
Roc
SRPRB
AAA_28
Gtr1_RagA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAU37087
UniProt:
Q65VC3
LinkDB
All DBs
Position
complement(443727..445091)
Genome browser
AA seq
454 aa
AA seq
DB search
MMTKETIVAQATPIGRGGVGILRVSGPLATEVAKAVVDKELKPRMANYLPFKDEDGTILD
QGIALYFKSPNSFTGEDVVEFQGHGGQVVLDLLLKRILQVKGVRLARPGEFSEQAFLNDK
LDLAQAEAIADLINASSEQAARSALKSLQGEFSKKINQLVDSVIYLRTYVEAAIDFPDEE
IDFLADGKIEGHLNDLIGQLDKVRSEAKQGSILREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDATDEVERIGITRAWNEIEQADRVI
LMLDSTDPDSKDLDQAKAEFLSKLPGNIPVTIVRNKSDLSGEKESIEEQEGFTVIRLSAQ
TQQGVSLLREHLKQSMGYQTGTEGGFLARRRHLEALEHAAEHLQIGRVQLTQFHAGELLA
EELRIVQDYLGEITGKFTSDDLLGNIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaaagaaaccattgttgcccaagccacccctatcggtcgcggaggtgtcggc
attttgcgcgtatcaggccctttggcgacggaagtggctaaagccgtagtagacaaagaa
ttaaagcctcgtatggcaaattacctgccttttaaagatgaagacggtacgatattagat
caggggatcgctttatattttaaatcaccgaattcctttaccggcgaagatgtggtggag
tttcaagggcatggcggtcaggtggtgcttgatcttctgttaaaacgcattttacaggta
aaaggcgttcgtttggcgcgcccgggtgaattttccgaacaggcttttttaaatgataaa
ttagatttggcgcaagcggaagctatcgcggatttaatcaacgcttcatcggaacaggcc
gcccgttccgcattaaaatctctgcaaggtgaattttccaaaaaaataaaccagttggtg
gattccgtcatttatttacgcacctatgtggaagccgcaatagactttcccgatgaagaa
attgattttcttgcggacggtaaaattgaaggccatttgaatgaccttatcggtcaattg
gataaagtacgttccgaggctaaacagggctccattttacgcgaagggatgaaagtggtt
atcgcagggcgcccgaatgcgggtaaatccagtctgctcaacgccttagccgggcgagaa
gcggcaattgtgaccgatattgccggcacaacccgcgatgtactgcgggaacatattcat
attgacggtatgccgttacatattattgataccgcaggtttgcgggatgccaccgatgaa
gtggaacgtatcggtataacgcgcgcctggaacgaaatcgaacaagcggatcgcgttatt
ttaatgctggacagcacggatcccgacagcaaggatttagatcaggcaaaagcggaattt
ttatccaaattaccgggcaatattccggtcactatcgtacgtaataaatcggatttaagc
ggtgaaaaagaaagtattgaagaacaggaaggttttacggtaattcgtttgtccgcacaa
acccagcaaggcgtttctctattgcgcgaacatttaaaacagtctatgggttatcaaacc
ggtaccgaaggcggattccttgcccgtcgccgccatttggaagcgctggaacatgccgca
gagcatttgcaaatcggtcgcgttcaactgacgcagttccatgccggcgaattattggct
gaagaattacgtatcgtgcaagattacttaggcgaaattaccgggaaatttacttccgac
gatttgctcggcaatattttcagttcattctgtatcggcaaatag
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