Mannheimia succiniciproducens: MS0493
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Entry
MS0493 CDS
T00201
Symbol
pnp
Name
(GenBank) Pnp protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS0493 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msu03019
]
MS0493 (pnp)
03016 Transfer RNA biogenesis [BR:
msu03016
]
MS0493 (pnp)
Enzymes [BR:
msu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MS0493 (pnp)
Messenger RNA biogenesis [BR:
msu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MS0493 (pnp)
Transfer RNA biogenesis [BR:
msu03016
]
Prokaryotic type
tRNA degradation factors
MS0493 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
OB_PDCD11
aRib
S1_2
S1_RRP5
KH_SLS1_2
KH-I_KHDC4-BBP
CbiD_C
Motif
Other DBs
NCBI-ProteinID:
AAU37100
UniProt:
Q65VB0
LinkDB
All DBs
Position
456524..458638
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AA seq
704 aa
AA seq
DB search
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVSVVAKKDVKEGQDFFPLTV
DYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFLNEIQIIATVVSVN
PQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQFVLNPTMAEQKQSRLDLVVAG
TDKAVLMVESEADILTEEQMLAAVVFGHQQQQVVVEAIKEFVAEAGKPRWDWVAPEPDSA
LISKVKAIAENRLGDAYRITEKQVRYEQIDAIKADVIAQITAEDEEVSEGKIVDIFTALE
SQIVRGRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQSLAVVTLGTERD
AQILDELTGERQDTFLFHYNFPPYSVGETGRVGSPKRREIGHGRLAKRGVAAVMPSISEF
PYVVRVVSEITESNGSSSMASVCGASLALMDAGVPVKSAVAGIAMGLVKEDDKFVVLSDI
LGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITPEIMQIALNQAKSARMHILGVMEQAI
SAPRAEISEFAPRIYTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAAVD
GNAVKTVMARIEDITAEVEAGAVYTGKVTRLADFGAFVAIVGNKEGLVHISQIAEERVEK
VSDYLQVGQEVQVKVVEIDRQGRIRLTMRDLGSKEESQELSVEQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccaattgtaaaacaatttaaatacggtcaacacaccgtaacattggaaaccggc
gctattgcccgtcaggcaacggcagccgtaatggcaagtatggacgatactacggtattt
gtttccgtggtggcaaagaaagatgtaaaagaaggtcaggatttcttcccgttaaccgta
gattatcaagaacgtacttatgcggcaggtaaaatcccgggtggtttctttaaacgtgaa
ggtcgtccttccgaaggcgaaacgttaatcgcgcgtttaatcgaccgtccgattcgtccg
ttgttccctgaaggtttcttaaacgaaattcaaatcattgcgacagtagtgtctgtcaat
ccgcagatcagccctgatttagtggcgatgatcggcgcttcagcggcactttcattatcc
ggcgtgcctttcaacggtcctatcggtgcggcacgtgtcggtttcattaacgatcaattc
gtattaaacccaaccatggcggaacaaaaacaaagccgtttggatttagtggttgcgggt
acggacaaagctgtgttaatggtggaatccgaagcggatattttaactgaagagcaaatg
ttggctgcggtggtgttcggtcatcaacagcaacaggttgtggttgaagccattaaagaa
tttgtggcggaagctggtaaacctcgctgggactgggttgctccggaaccggattcagca
ttaatcagcaaagtgaaagcaatcgccgaaaaccgtttgggtgacgcataccgcatcact
gaaaaacaagtgcgttacgaacaaatcgacgccattaaagcggatgtgattgcacaaatc
acagcggaagatgaagaagttagcgaaggcaaaatcgttgatattttcaccgcacttgaa
agccaaatcgtgcgcggacgtatcattgccggcgaaccgcgtattgacggtcgtaccgtt
gacacggtgcgcgccttagacatttgcaccggcgtgttgccgcgcacccacggttcggca
atttttacccgtggtgaaacccaatcattagcggtggttaccttaggtacggaacgcgat
gcgcaaattcttgatgaattaacgggcgaacgccaggatactttcttattccactacaat
ttccctccgtattctgtaggtgaaacgggtcgtgtcggttcgccgaaacgtcgtgagatc
ggtcacggtcgtttagctaaacgtggtgtggcagctgtaatgccaagcatcagcgaattc
ccgtatgtggttcgcgtagtgtctgaaatcactgaatcaaacggttcttcatcaatggcg
tctgtttgcggcgcatcattggcgttgatggatgccggtgtgccggttaaatccgccgta
gcgggtatcgccatgggcttggtgaaagaagacgataaatttgtggtgctttccgacatt
ttaggtgacgaagaccatttaggcgatatggacttcaaagtagcgggtacccgtaccggt
gtgactgcacttcaaatggatattaaaatcgaaggtattacgccggaaattatgcaaatt
gctttgaaccaggcgaaaagtgcgcgtatgcacattttaggtgtaatggaacaagcgatt
tcggcgccacgtgcggaaatttccgaattcgcaccgcgtatttacaccatgaaaattgat
ccgaagaaaatcaaagacgtgattggtaaaggtggtgcgacgattcgtgcgttaaccgaa
gaaaccggtacctctatcgatattgatgatgacggtacggtgaaaatcgccgctgttgac
ggcaatgcggtgaaaaccgtgatggcgcggattgaagacattaccgccgaagtggaagcg
ggcgcggtttacaccggtaaagtgacccgtcttgcggatttcggcgctttcgtggctatc
gttggcaacaaagaaggattagttcatatttctcaaattgcggaagaacgcgttgagaaa
gtaagtgattatcttcaagtcggtcaagaagttcaggttaaagtggtggaaatcgatcgt
cagggtcgtatccgtttaactatgagagaccttggttcaaaagaagaatctcaagaacta
tctgttgaacaatag
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