Mannheimia succiniciproducens: MS0570
Help
Entry
MS0570 CDS
T00201
Symbol
holB
Name
(GenBank) HolB protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
msu
Mannheimia succiniciproducens
Pathway
msu03030
DNA replication
msu03430
Mismatch repair
msu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MS0570 (holB)
03430 Mismatch repair
MS0570 (holB)
03440 Homologous recombination
MS0570 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msu03032
]
MS0570 (holB)
03400 DNA repair and recombination proteins [BR:
msu03400
]
MS0570 (holB)
Enzymes [BR:
msu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MS0570 (holB)
DNA replication proteins [BR:
msu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MS0570 (holB)
DNA repair and recombination proteins [BR:
msu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MS0570 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
YdgH_BhsA-like
Motif
Other DBs
NCBI-ProteinID:
AAU37177
UniProt:
Q65V33
LinkDB
All DBs
Position
531097..532101
Genome browser
AA seq
334 aa
AA seq
DB search
MGKFNFVMTAIIYPWLQSYYERITAAFQQGYGHHALLFRAEQGIGADQLIHAVANWLMCQ
HSSPRPCGECHSCRLFAAGNHPDVYQLAPVENKDIGVDQVREINEKVSQRAQQNGNKAVY
VQSAERLTESAANALLKTLEEPRPNTYFLLNADLSSPLMTTIYSRCQVWLINTPSEQQAL
NWLQLHNYSEISEIQTALRISYGRPLLALHCLEQGWLEKRREFFRAFWLFYTRRSPLELL
PLFDKELILQQVDWLLAFLSDALKDKLNITSGWICRDLIRGIQQFNERQTVAGLLTATKI
MQKVRSDLVQINAVNQELILLDGLTRLITEVFEH
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ttgggtaaattcaatttcgttatgacagcaataatttatccttggctccaatcctattac
gaaagaataaccgctgcgtttcaacaggggtatggtcatcatgctctgttgtttcgtgcg
gagcaggggataggcgcagaccaattgattcatgccgtggcaaactggctgatgtgtcag
catagttctccgcgaccttgcggagaatgccatagttgccgattgtttgccgccggcaac
catcccgatgtgtatcagctggcgcctgttgaaaacaaagatatcggcgtagatcaggtg
cgcgaaattaatgaaaaggttagccagcgtgcgcaacaaaacggtaataaagcggtttat
gtgcagagcgcggaacgtttaacggaaagtgccgccaacgctttattaaaaacgctggaa
gaaccgcgaccaaatacttattttttattaaatgcggatttatcgtcacctttaatgacg
acgatttatagtcgctgccaagtgtggctgattaatacgccgtcggaacaacaagcgctg
aattggttgcaactacataattacagtgaaatttccgaaattcagaccgcacttcgcatt
agttacggtcgtcctttattggcattgcattgtttggaacagggctggctggaaaaacgt
cgtgaattttttcgcgccttttggttgttttatacccgccgttctcctcttgaattattg
ccgctgtttgataaggaactgattctgcaacaagtggattggcttttggcatttttatcc
gatgcgctgaaagataaattaaatataacatccggttggatttgccgggatttaatccgc
ggcatccaacagttcaatgaacgacaaaccgtcgccggcttattaaccgcaactaaaatt
atgcaaaaagtgcggtcggatttagtgcaaattaatgcggtaaatcaggaattaattttg
ctggacggtttaacccgcttaattacggaagtttttgaacattaa
DBGET
integrated database retrieval system
